Gene EcolC_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3110 
Symbol 
ID6066312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3405677 
End bp3406978 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content51% 
IMG OID641602526 
Productputative purine permease YbbY 
Protein accessionYP_001726060 
Protein GI170021106 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.39747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAATT TTGCAGTCAG CCGCGAAAGC CTGTTATCAG GATTTCAGTG GTTTTTCTTT 
ATTTTTTGCA ACACGGTTGT GGTTCCTCCT ACGCTACTTT CTGCTTTTCA GTTGCCGCAA
AGTAGCCTGC TTACGCTCAC GCAATATGCT TTTCTTGCTA CCGCACTGGC CTGCTTCGCT
CAGGCGTTCT GCGGTCATCG TCGCGCTATT ATGGAAGGGC CGGGTGGCCT GTGGTGGGGA
ACCATCCTTA CTATCACCCT TGGCGAAGCA TCGCGCGGGA CACCGATCAA CGATATCGCT
ACCAGTCTGG CGGTGGGGAT TGCACTCTCC GGCGTGCTGA CGATGTTGAT TGGTTTTAGC
GGATTAGGCC ATCGCCTGGC ACGGTTATTT ACGCCGTCGG TGATGGTCTT GTTTATGTTG
ATGCTGGGCG CGCAGCTGAC CACTATCTTT TTCAAAGGTA TGCTCGGGCT GCCGTTTGGC
ATAGCCGACC CAAATTTTAA AATTCAGTTA CCACCGTTCG CGCTCTCGGT GGCGGTGATG
TGCCTGGTAC TGGCGATGAT TATCTTTCTG CCGCAACGTT TTGCCCGTTA TGGCCTGCTG
GTCGGTACGA TAACCGGCTG GTTGTTGTGG TACTTTTGCT TTCCTTCTTC GCATTCGCTC
TCCGGTGAGT TGCACTGGCA GTGGTTCCCG CTCGGCAGTG GCGGTGCTTT GTCGCCGGGA
ATTATTCTGA CGGCGGTGAT TACAGGTCTG GTGAATATCA GCAATACCTA CGGTGCGATT
CGGGGCACGG ATGTTTTTTA TCCGCAGCAG GGCGCGGGGA ATACGCGTTA TCGTCGTAGC
TTTGTGGCGA CCGGATTTAT GACGCTGATA ACCGTACCGC TGGCGGTAAT TCCATTTTCA
CCGTTTGTTT CATCCATTGG TTTATTAACC CAGACTGGCG ATTACACGCG GCGTTCGTTT
ATTTATGGCA GCGTTATTTG CCTGCTGGTG GCGCTGGTTC CGGCACTCAC ACGACTGTTT
TGCAGTATCC CTTTACCCGT GAGTAGCGCG GTCATGCTGG TTTCTTATCT GCCTTTACTC
TTTTCCGCGC TGGTGTTTAG CCAGCAAATA ACCTTTACCG CTCGCAATAT TTATCGACTC
GCATTGCCGT TATTTGTCGG CATATTTTTA ATGGCATTAC CGCCTGTGTA TCTGCAAGAC
CTTCCATTAA CGCTGCGTCC TCTGCTCAGT AACGGCTTAT TGGTCGGGAT TTTACTGGCT
GTTCTTATGG ATAATCTTAT TCCGTGGGAA CGCATCGAAT AA
 
Protein sequence
MFNFAVSRES LLSGFQWFFF IFCNTVVVPP TLLSAFQLPQ SSLLTLTQYA FLATALACFA 
QAFCGHRRAI MEGPGGLWWG TILTITLGEA SRGTPINDIA TSLAVGIALS GVLTMLIGFS
GLGHRLARLF TPSVMVLFML MLGAQLTTIF FKGMLGLPFG IADPNFKIQL PPFALSVAVM
CLVLAMIIFL PQRFARYGLL VGTITGWLLW YFCFPSSHSL SGELHWQWFP LGSGGALSPG
IILTAVITGL VNISNTYGAI RGTDVFYPQQ GAGNTRYRRS FVATGFMTLI TVPLAVIPFS
PFVSSIGLLT QTGDYTRRSF IYGSVICLLV ALVPALTRLF CSIPLPVSSA VMLVSYLPLL
FSALVFSQQI TFTARNIYRL ALPLFVGIFL MALPPVYLQD LPLTLRPLLS NGLLVGILLA
VLMDNLIPWE RIE