Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3004 |
Symbol | |
ID | 6065946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3285048 |
End bp | 3285629 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641602421 |
Product | LPS-assembly lipoprotein RlpB |
Protein accession | YP_001725956 |
Protein GI | 170021002 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00131027 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGATATC TGGCAACATT GTTGTTATCT CTGGCGGTGT TAATCACCGC CGGGTGTGGC TGGCATCTGC GTGATACCAC GCAGGTTCCT TCCACTATGA AGGTCATGAT TCTGGACTCA GGCGATCCGA ACGGGCCATT AAGCCGTGCG GTGCGTAACC AGTTACGTCT GAATGGTGTC GAGTTGCTTG ATAAAGAAAC CACGCGTAAG GACGTTCCAT CCCTGCGTTT GGGTGCTGTA TCAATCTCGC AGGATACCGC GTCGGTTTTC CGTAATGGTC AAACTGCGGA ATATCAGATG GTGATGACTG TTAGCGCGTC GGTATTGATT CCTGGACGAG ATATCTACCC GATTAGCGCC AAAGTCTTCC GTTCGTTCTT CGATAACCCG CAAATGGCGT TAGCGAAAGA TAACGAGCAG GAAATGATCA TTAAAGAGAT GTACGACCGT GCTGCCGAAC AGCTGATTCG TAAGCTACCA AGCATCCGTG CTGCGGATAT TCGTTCCGAC GAAGAACAGA CGTCGACCAC AACGGATACT CCGGCAACGC CTGCACGCGT CTCCACCACG CTGGGTAACT GA
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Protein sequence | MRYLATLLLS LAVLITAGCG WHLRDTTQVP STMKVMILDS GDPNGPLSRA VRNQLRLNGV ELLDKETTRK DVPSLRLGAV SISQDTASVF RNGQTAEYQM VMTVSASVLI PGRDIYPISA KVFRSFFDNP QMALAKDNEQ EMIIKEMYDR AAEQLIRKLP SIRAADIRSD EEQTSTTTDT PATPARVSTT LGN
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