Gene EcolC_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3000 
Symbol 
ID6065934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3279815 
End bp3280522 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content46% 
IMG OID641602417 
Producthypothetical protein 
Protein accessionYP_001725952 
Protein GI170020998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATGG AGTCGCAAAA AATATTGTTT GCACTTTCCA CTCCGATGGA AATACGCAAT 
GAATGCTGTT TACCTTCGCA TTCATCACCC AAAATGTATT TAGGTACATG CTTTTTTGAC
CTTTCTTCCT CATGGGGAAT TGATGACCGT GATGACCTGC TGCGCACAAT TCACCGAATG
ATCGATAACG GTCATGCCGC TCGGTTGGCA GGGTTTTATC ACCGCTGGTT TCGTTATTCG
CCATGTGAAT GGCGTGACTA TCTTGCTGAA CTAAATGAGC AAGGTCAGGC TTATGCGCAA
TTTGTCGCCA GCACCGCCGA ATGCTGTGGC GAAGGGGGAA TCAAAGCCTG GGATTATGTC
CGGATGGGTT TTTTAAGCCG AATGGGCGTA CTTAATAACT GGTTGAGCGA AGAAGAAAGT
CTATGGATCC AGTCGCGCAT TCATCTACGG GCTCTACGTT ATTATAGTAA CTGGCGGCAA
TACTTTGCCG GTTATACCTT TGGTCGGCAA TATTGGCAGT CTCCCGAAGA TGATCATCTG
CCTTTATTAC GCGAATTCTT AGCGCGTAAA GAATACGACG ATTCCGGCAA TGATATGTTT
TATCAATTAT TTGCCAGTGA TGATGCGTAT TACCCTACCT TGTCCTGGCA ACCATTGGCT
TACTATTCTG CATGCCCGGA AACGCTTAAG GATATGAGCG ACCTATGA
 
Protein sequence
MDMESQKILF ALSTPMEIRN ECCLPSHSSP KMYLGTCFFD LSSSWGIDDR DDLLRTIHRM 
IDNGHAARLA GFYHRWFRYS PCEWRDYLAE LNEQGQAYAQ FVASTAECCG EGGIKAWDYV
RMGFLSRMGV LNNWLSEEES LWIQSRIHLR ALRYYSNWRQ YFAGYTFGRQ YWQSPEDDHL
PLLREFLARK EYDDSGNDMF YQLFASDDAY YPTLSWQPLA YYSACPETLK DMSDL