| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2998 |
|---|
| Symbol | |
|---|
| ID | 6065923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3277827 |
|---|
| End bp | 3278381 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641602415 |
|---|
| Product | Sel1 domain-containing protein |
|---|
| Protein accession | YP_001725950 |
|---|
| Protein GI | 170020996 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AACTAATGTA TATATTCGCA ATTTTTATAG TTGCAGCAAT TACCTGTATT
AGCCAACCCA AGAAAACGAC GTTGCGTGAT AAAGCCATGG TGAATTATGC CTTTGATTAT
TTAAGCTCAC CGGGCAGTCT TCCATTCACC ACGGCAGCCA CGGAGCTTTC CGCGATTCAT
GGTCACTCAA CGTCGCAATA TCGCCTTGGA GAATTTTATC TTCATGGTAG CGACGGTAAA
CCACTGGATT ATACACAGGC GAGATACTGG TATGAGCAAT CAGCGGAACA GGAAAATCCA
CGCGCGCAAA GTAAACTGGG GTGGATCTAC CTCAAAGGTC TGGGGGTCAA ACCCGACACC
CGTAAAGCAA TTCTCTGGTA TAAGGAAGCA GCTGAACAAG GGTATGCTCA TGCTCAATAT
ACTTTAGGTT TGATCTACAG AAATGGCTCA GGTATTAATG TTAACCATTA TGAATCTCAA
AAATGGTTAA AACTGGCCGC CAAACAACAT TACAAAAATG CGGAAAGATT ACTTGCCGGG
CTTCCCGCAC ATTAA
|
|---|
| Protein sequence | MNKKLMYIFA IFIVAAITCI SQPKKTTLRD KAMVNYAFDY LSSPGSLPFT TAATELSAIH
GHSTSQYRLG EFYLHGSDGK PLDYTQARYW YEQSAEQENP RAQSKLGWIY LKGLGVKPDT
RKAILWYKEA AEQGYAHAQY TLGLIYRNGS GINVNHYESQ KWLKLAAKQH YKNAERLLAG
LPAH
|
|---|
| |