Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2992 |
Symbol | |
ID | 6065884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3271304 |
End bp | 3271978 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641602409 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001725944 |
Protein GI | 170020990 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGAGT TTGACTGGAG TTCCATTGTT CCTTCCCTGC CATATCTGCT CGACGGGCTG GTGATCACCC TGAAAATCAC CGTCACGGCA GTCGTGATTG GTATTTTGTG GGGTACCATG CTGGCGGTGA TGCGCTTGTC CAGCTTCGCG CCTGTTTCGT GGTTTGCCAA AGCCTACGTT AACGTATTCC GCTCGATTCC TTTAGTCATG GTTTTGCTGT GGTTTTACTT GATTGTGCCG GGATTTCTGC AAAATGTGCT GGGATTATCG CCAAAAAATG ATATTCGTTT AATTTCGGCG ATGGTGGCGT TTTCGATGTT TGAAGCGGCC TACTATTCAG AGATTATCCG TGCCGGTATT CAAAGTATTT CTCGTGGTCA GTCGAGCGCC GCGCTGGCGT TGGGAATGAC TCACTGGCAG TCGATGAAAC TGATTATTCT GCCGCAGGCG TTCCGCGCGA TGGTGCCGCT GCTGCTCACT CAGGGCATCG TACTGTTCCA GGATACCTCG CTGGTGTATG TGTTATCTCT GGCCGATTTC TTCCGTACCG CCTCAACCAT TGGTGAGCGT GATGGTACGC AGGTTGAGAT GATCCTGTTT GCCGGATTTG TTTATTTCGT TATTAGTCTT AGCGCGTCGT TGTTGGTCAG CTACTTGAAA AGAAGGACAG CATAA
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Protein sequence | MYEFDWSSIV PSLPYLLDGL VITLKITVTA VVIGILWGTM LAVMRLSSFA PVSWFAKAYV NVFRSIPLVM VLLWFYLIVP GFLQNVLGLS PKNDIRLISA MVAFSMFEAA YYSEIIRAGI QSISRGQSSA ALALGMTHWQ SMKLIILPQA FRAMVPLLLT QGIVLFQDTS LVYVLSLADF FRTASTIGER DGTQVEMILF AGFVYFVISL SASLLVSYLK RRTA
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