Gene EcolC_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2928 
SymbolsucC 
ID6065523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3191140 
End bp3192306 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content55% 
IMG OID641602340 
Productsuccinyl-CoA synthetase subunit beta 
Protein accessionYP_001725882 
Protein GI170020928 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.523722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAC ATGAATATCA GGCAAAACAA CTTTTTGCCC GCTATGGCTT ACCAGCACCG 
GTGGGTTATG CCTGTACTAC TCCGCGCGAA GCAGAAGAAG CCGCTTCAAA AATCGGTGCC
GGTCCGTGGG TAGTGAAATG TCAGGTTCAC GCTGGTGGCC GCGGTAAAGC GGGCGGTGTG
AAAGTTGTAA ACAGCAAAGA AGACATCCGT GCTTTTGCAG AAAACTGGCT CGGCAAGCGT
CTGGTAACGT ATCAAACAGA TGCCAATGGC CAACCGGTTA ACCAGATTCT GGTTGAAGCG
GCGACCGATA TCGCTAAAGA GCTGTATCTC GGTGCCGTTG TAGACCGTAG TTCCCGTCGT
GTGGTCTTTA TGGCCTCCAC CGAAGGCGGC GTGGAAATCG AAAAAGTGGC GGAAGAAACT
CCGCACCTGA TCCACAAAGT TGCGCTTGAT CCGCTGACTG GCCCGATGCC GTATCAGGGA
CGCGAGCTGG CGTTCAAACT GGGTCTGGAA GGTAAACTGG TTCAGCAGTT CACCAAAATC
TTCATGGGCC TGGCGACCAT TTTCCTGGAG CGCGACCTGG CGTTGATCGA AATCAACCCG
CTGGTCATCA CCAAACAGGG CGATCTGATT TGCCTCGACG GCAAACTGGG CGCTGACGGC
AACGCACTGT TCCGCCAGCC TGATCTGCGC GAAATGCGTG ACCAGTCGCA GGAAGATCCG
CGTGAAGCAC AGGCTGCACA GTGGGAACTG AACTACGTTG CGCTGGACGG TAACATCGGT
TGTATGGTTA ACGGCGCAGG TCTGGCGATG GGTACGATGG ACATCGTTAA ACTGCACGGC
GGCGAACCGG CTAACTTCCT TGACGTTGGC GGCGGCGCAA CCAAAGAACG TGTAACCGAA
GCGTTCAAAA TCATCCTCTC TGACGACAAA GTGAAAGCCG TTCTGGTTAA CATCTTCGGC
GGTATCGTTC GTTGCGACCT GATCGCTGAC GGTATCATCG GCGCGGTAGC GGAAGTGGGT
GTTAACGTAC CGGTCGTGGT ACGTCTGGAA GGTAACAACG CCGAACTCGG CGCGAAGAAA
CTGGCTGACA GCGGCCTGAA TATTATTGCA GCAAAAGGTC TGACGGATGC AGCTCAGCAG
GTTGTTGCCG CAGTGGAGGG GAAATAA
 
Protein sequence
MNLHEYQAKQ LFARYGLPAP VGYACTTPRE AEEAASKIGA GPWVVKCQVH AGGRGKAGGV 
KVVNSKEDIR AFAENWLGKR LVTYQTDANG QPVNQILVEA ATDIAKELYL GAVVDRSSRR
VVFMASTEGG VEIEKVAEET PHLIHKVALD PLTGPMPYQG RELAFKLGLE GKLVQQFTKI
FMGLATIFLE RDLALIEINP LVITKQGDLI CLDGKLGADG NALFRQPDLR EMRDQSQEDP
REAQAAQWEL NYVALDGNIG CMVNGAGLAM GTMDIVKLHG GEPANFLDVG GGATKERVTE
AFKIILSDDK VKAVLVNIFG GIVRCDLIAD GIIGAVAEVG VNVPVVVRLE GNNAELGAKK
LADSGLNIIA AKGLTDAAQQ VVAAVEGK