Gene EcolC_2917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2917 
Symbol 
ID6065485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3179043 
End bp3179471 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content52% 
IMG OID641602329 
Productcolicin uptake protein TolR 
Protein accessionYP_001725871 
Protein GI170020917 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000710621 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAG CGCGTGGACG AGGTCGTCGC GATCTCAAGT CCGAAATCAA CATTGTACCG 
TTGCTGGACG TACTGCTGGT GCTGTTGCTG ATCTTTATGG CGACAGCGCC CATCATCACC
CAGAGCGTGG AGGTCGATCT GCCAGACGCT ACTGAATCAC AGGCGGTGAG CAGTAACGAT
AATCCGCCAG TGATTGTTGA AGTGTCTGGT ATTGGTCAGT ACACCGTGGT GGTTGAGAAA
GATCGCCTGG AGCGTTTACC ACCAGAGCAG GTGGTGGCGG AAGTGTCCAG CCGTTTCAAG
GCCAACCCGA AAACGGTCTT TCTGATCGGT GGCGCAAAAG ATGTGCCTTA CGATGAAATA
ATTAAAGCAC TGAACTTGTT ACATAGTGCG GGTGTGAAAT CGGTTGGTTT AATGACGCAG
CCTATCTAA
 
Protein sequence
MARARGRGRR DLKSEINIVP LLDVLLVLLL IFMATAPIIT QSVEVDLPDA TESQAVSSND 
NPPVIVEVSG IGQYTVVVEK DRLERLPPEQ VVAEVSSRFK ANPKTVFLIG GAKDVPYDEI
IKALNLLHSA GVKSVGLMTQ PI