Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2810 |
Symbol | |
ID | 6065018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3070368 |
End bp | 3071696 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641602216 |
Product | diguanylate cyclase |
Protein accession | YP_001725765 |
Protein GI | 170020811 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGAA TCAATAAGTT CGTACTTACA GTCAGTCTGC TGATTTTTAT CATGATTTCA GCAGTTGCCT GCGGGATCTA CACTCAAATG GTAAAGGAAC GGGTGTATGG CCTGAAACAG TCCGTTATTG ATACTGCTTT TGCGGTGGCA AATATTGCTG AATATCGGCG TAGCGTGGCA ATTGATCTTA TCAACACGCT AAATCCCACG GAGGAACAGC TGTTGGTTGG CTTACGCACA GCTTACGCTG ACTCGGTTTC ACCCTCTTAC TTGTACGATG TCGGTCCTTA TCTGATTTCC AGTGACGAAT GTATTCAGGT AAAGGAGTTC GAGAAAAATT ATTGTGCAGA TATTATGCAG GTTGTGAAGT ATCGACATGT CAAAAATACA GGGTTTATCT CTTTTGACGG TAAAACCTTC GTCTATTACC TCTATCCGGT AACTCACAAT CGTAGTCTGA TATTTTTGCT TGGTCTGGAG CGTTTTTCTT TACTGTCAAA ATCTCTGGCG ATGGATAGCG AGAACCTGAT GTTCTCTCTG TTTAAGAACG GTAAACCGGT GACCGGTGAT GAATTTAATG CTAAAAACAC CATTTTCACC GTTTCGGAAG CGATGGAGCA CTTTGCCTAT TTGCCGACCG GATTGTACGT ATTTGCGTAT AAAAAAGATG TTTATTTGCG GGTTTGTACA TTGATCATTT TCTTTGCCGC ATTGGTGGCA GTGATATCGG GTGCCAGTTG CCTCTATCTG GTACGCAGAG TGATTAATCG TGGTATTGTG GAGAAAGAAG CCATTATTAA TAACCATTTT GAACGCGTAC TGGATGGCGG GCTTTTCTTT TCGGCTGCCG ATGTCAAAAA ACTCTACAGT ATGTATAACT CGGCGTTCCT GGACGACCTG ACCAAAGCAA TGGGCAGAAA ATCCTTTGAC GAAGATTTAA AAGCGCTGCC GGAAAAAGGC GGTTATTTGT GCCTGTTTGA CGTCGATAAA TTCAAAAATA TTAACGACAC CTTCGGTCAT TTGCTGGGCG ATGAAGTGTT GATGAAAGTG GTGAAAATCC TTAAATCACA GATCCCGGTA GATAAAGGTA AAGTCTACCG CTTCGGCGGT GACGAATTTG CGGTGATTTA TACTGGCGGC ACGCTGGAAG AGTTGCTATC GATACTAAAA GAAATCGTTC ATTTCCAGGT GGGAAGCATT AATTTAAGCA CCAGTATCGG TGTAGCGCAT TCAAATGAAT GTACTACCGT CGAACGCTTG AAAATGCTGG CGGATGAGCG ACTGTATAAG AGTAAGAAAA ACGGCAGGGC TCAGATTAGC TGGCAGTAG
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Protein sequence | MSRINKFVLT VSLLIFIMIS AVACGIYTQM VKERVYGLKQ SVIDTAFAVA NIAEYRRSVA IDLINTLNPT EEQLLVGLRT AYADSVSPSY LYDVGPYLIS SDECIQVKEF EKNYCADIMQ VVKYRHVKNT GFISFDGKTF VYYLYPVTHN RSLIFLLGLE RFSLLSKSLA MDSENLMFSL FKNGKPVTGD EFNAKNTIFT VSEAMEHFAY LPTGLYVFAY KKDVYLRVCT LIIFFAALVA VISGASCLYL VRRVINRGIV EKEAIINNHF ERVLDGGLFF SAADVKKLYS MYNSAFLDDL TKAMGRKSFD EDLKALPEKG GYLCLFDVDK FKNINDTFGH LLGDEVLMKV VKILKSQIPV DKGKVYRFGG DEFAVIYTGG TLEELLSILK EIVHFQVGSI NLSTSIGVAH SNECTTVERL KMLADERLYK SKKNGRAQIS WQ
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