| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2798 |
|---|
| Symbol | |
|---|
| ID | 6064954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3059946 |
|---|
| End bp | 3060761 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641602204 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_001725753 |
|---|
| Protein GI | 170020799 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.373732 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.741017 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTA AATTAATTGC GGTAGACATG GATGGTACTT TCTTAAGCGA TCAAAAAACC
TATAACCGTG AGCGGTTTAT GGCTCAGTAT CAGCAAATGA AAGCACAAGG CATTCGCTTT
GTGGTCGCCA GCGGGAATCA ATATTATCAG TTGATCTCTT TCTTCCCTGA AATTGCTAAT
GAAATTGCCT TTGTGGCTGA AAACGGCGGC TGGGTAGTGA GTGAAGGCAA AGATGTTTTT
AATGGCGAGC TGTCGAAGGA TGCCTTTACT ACTGTCGTGG AACATTTGCT GACGCGCCCG
GAAGTGGAAA TTATTGCCTG CGGAAAAAAT AGCGCCTATA CGCTCAAAAA ATATGACGAT
GCCATGAAAA CGGTGGCGGA AATGTATTAT CACCGTCTGG AATACGTCGA TAACTTTGAC
AACTTAGAAG ATATTTTCTT TAAGTTTGGC CTGAATCTTT CCGATGAACT GATTCCACAA
GTACAAAAAG CATTACATGA GGCCATCGGC GATATTATGG TGCCAGTCCA CACCGGCAAC
GGCAGCATCG ATCTGATTAT CCCCGGCGTA CATAAAGCCA ATGGCCTTCG CCAACTGCAG
AAATTATGGG GAATAGACGA CAGCGAAGTG GTGGTCTTTG GCGATGGCGG TAACGATATT
GAGATGCTGC GTCAGGCAGG CTTTAGTTTT GCAATGGAAA ATGCCGGCAG CGCGGTCGTC
GCAGCGGCAA AATACCGGGC AGGCTCCAAT AACCGTGAAG GCGTACTGGA TGTGATCGAT
AAAGTGCTTA AACACGAAGC GCCATTTGAC CAATAA
|
|---|
| Protein sequence | MSIKLIAVDM DGTFLSDQKT YNRERFMAQY QQMKAQGIRF VVASGNQYYQ LISFFPEIAN
EIAFVAENGG WVVSEGKDVF NGELSKDAFT TVVEHLLTRP EVEIIACGKN SAYTLKKYDD
AMKTVAEMYY HRLEYVDNFD NLEDIFFKFG LNLSDELIPQ VQKALHEAIG DIMVPVHTGN
GSIDLIIPGV HKANGLRQLQ KLWGIDDSEV VVFGDGGNDI EMLRQAGFSF AMENAGSAVV
AAAKYRAGSN NREGVLDVID KVLKHEAPFD Q
|
|---|
| |