Gene EcolC_2721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2721 
Symbol 
ID6066518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2995196 
End bp2995891 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content52% 
IMG OID641602127 
Productaquaporin Z 
Protein accessionYP_001725676 
Protein GI170020722 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAA AATTAGCAGC TGAATGTTTT GGTACTTTCT GGCTTGTTTT TGGTGGCTGT 
GGTAGTGCTG TACTGGCCGC AGGCTTCCCG GAATTAGGCA TTGGTTTTGC CGGCGTGGCG
TTGGCGTTCG GTCTGACCGT TCTGACGATG GCCTTTGCTG TTGGTCATAT TTCTGGTGGT
CATTTTAACC CGGCGGTCAC TATTGGTTTA TGGGCTGGCG GACGTTTTCC GGCAAAAGAA
GTCGTTGGCT ACGTAATTGC CCAGGTTGTC GGCGGTATTG TTGCGGCAGC GCTGCTGTAT
TTAATTGCCA GTGGTAAAAC GGGTTTTGAC GCGGCAGCCA GCGGTTTTGC TTCTAACGGT
TATGGCGAGC ATTCACCAGG CGGTTATTCC ATGCTTTCCG CGCTGGTAGT TGAACTGGTA
TTGAGTGCAG GTTTCCTGTT GGTGATCCAC GGCGCAACCG ACAAATTCGC TCCGGCAGGT
TTTGCGCCGA TCGCTATTGG TCTGGCCTTA ACCCTGATTC ACTTAATCAG TATTCCGGTG
ACTAACACTT CTGTTAACCC GGCGCGCAGC ACCGCGGTTG CTATCTTCCA GGGCGGCTGG
GCATTAGAAC AACTGTGGTT CTTCTGGGTG GTGCCAATTG TCGGCGGCAT TATCGGTGGT
CTGATTTACC GGACCCTGCT GGAAAAGCGT GATTAA
 
Protein sequence
MFRKLAAECF GTFWLVFGGC GSAVLAAGFP ELGIGFAGVA LAFGLTVLTM AFAVGHISGG 
HFNPAVTIGL WAGGRFPAKE VVGYVIAQVV GGIVAAALLY LIASGKTGFD AAASGFASNG
YGEHSPGGYS MLSALVVELV LSAGFLLVIH GATDKFAPAG FAPIAIGLAL TLIHLISIPV
TNTSVNPARS TAVAIFQGGW ALEQLWFFWV VPIVGGIIGG LIYRTLLEKR D