Gene EcolC_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2144 
Symbol 
ID6067128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2339820 
End bp2340848 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content54% 
IMG OID641601552 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001725111 
Protein GI170020157 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGT TTATTCAGAA CAACCGTGAA ATCACGGCAC TGCTGGCGGT GGTGCTGCTG 
TTTGTATTAC CCGGTTTTCT CGACCGCCAG TATTTAAGTG TGCAAACGCT GACCATGGTT
TATAGCAGCG CGCAAATCCT GATCCTGCTG GCAATGGGCG CGACGCTGGT AATGCTTACG
CGCAATATTG ATGTTTCAGT GGGTTCGATT ACCGGAATGT GCGCGGTGCT GTTGGGGATG
TTACTGAACG CAGGATATTC ACTACCTGTT GCCTGTGTCA CGACTTTACT GCTTGGTTTG
CTCGCGGGAT TTTTCAACGG TGTCCTGGTC GCGTGGCTAA AGATTCCTGC CATTGTTGCC
ACCCTTGGCA CGTTAGGGTT GTACAGAGGC ATCATGTTGC TGTGGACTGG CGGTAAATGG
ATTGAAGGGT TACCCGCCGA ACTGAAACAG CTCTCCGCAC CGCTGCTGTT TGGCGTTTCC
GCGATTGGTT GGTTGACGAT AATTCTGGTG GCATTTATGG CCTGGCTGCT GGCGAAGACG
GCGTTTGGAC GCAGTTTTTA TGCCACGGGC GATAATTTAC AGGGCGCTCG TCAACTGGGC
GTTCGTACGG AAGCCATTCG CATTGTGGCA TTTTCGTTGA ACGGCTGCAT GGCGGCACTG
GCGGGAATTG TGTTTGCTTC GCAGATTGGT TTTATCCCCA ACCAGACCGG TACCGGGCTG
GAGATGAAAG CAATTGCAGC CTGCGTGCTG GGCGGCATTA GTTTGCTCGG CGGTTCCGGT
GCGATCATCG GTGCGGTACT CGGCGCATGG TTCCTGACGC AGATCGATAG CGTACTGGTG
CTGTTGCGCA TTCCGGCATG GTGGAACGAT TTTATCGCGG GCCTCGTGCT GCTGGCGGTG
CTGGTGTTTG ATGGACGCCT GCGTTGTGCG CTGGAACGTA ATCTACGGCG GCAAAAATAT
GCCCGCTTTA TGACGCCACC GCCATCCGTT AAACCCGCTT CGTCAGGTAA AAAACGGGAG
GCCGCATAA
 
Protein sequence
MLKFIQNNRE ITALLAVVLL FVLPGFLDRQ YLSVQTLTMV YSSAQILILL AMGATLVMLT 
RNIDVSVGSI TGMCAVLLGM LLNAGYSLPV ACVTTLLLGL LAGFFNGVLV AWLKIPAIVA
TLGTLGLYRG IMLLWTGGKW IEGLPAELKQ LSAPLLFGVS AIGWLTIILV AFMAWLLAKT
AFGRSFYATG DNLQGARQLG VRTEAIRIVA FSLNGCMAAL AGIVFASQIG FIPNQTGTGL
EMKAIAACVL GGISLLGGSG AIIGAVLGAW FLTQIDSVLV LLRIPAWWND FIAGLVLLAV
LVFDGRLRCA LERNLRRQKY ARFMTPPPSV KPASSGKKRE AA