Gene EcolC_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2107 
Symbol 
ID6067219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2300375 
End bp2301118 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content59% 
IMG OID641601515 
ProductNLP/P60 protein 
Protein accessionYP_001725074 
Protein GI170020120 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000238128 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGA CAGAATCAGC GATTCTGGCG CACGCCCGGC GATGTGCGCC AGCGGAGTCG 
TGCGGCTTCG TGGTGAGAAC ACCGGAGGGG GAAAGATATT TTCCCTGCGT GAATATCTCC
GGTGAGCCGG AGGCGTATTT CCGTATGTCG CCGGAAGACT GGCTGCAGGC AGAAATGCAG
GGTGAGATTG TGGCGCTGGT CCACAGCCAC CCCGGTGGTC TGCCCTGGCT GAGTGAGGCC
GACCGGCGGC TGCAGGTGCA GAGTGATTTG CCGTGGTGGC TGGTCTGCCG GGGGACGATT
CATAAGTTCC GCTGTGTGCC GCATCTCACC GGGCGGCGCT TTGAGCACGG TGTGACGGAC
TGTTACACAC TGTTCCGGGA TGCTTATCAT CTGGCGGGGA TTGAGATGCC GGACTTTCAT
CGTGAGGATG ACTGGTGGCG TAACGGCCAG AATCTCTATC TGGATAATCT GGAGGCGACG
GGGCTGTATC AGGTGCCGTT GTCATCAGCA CAACCGGGCG ATGTGCTGCT GTGCTGTTTT
GGTTCATCGG TGCCGAATCA CGCCGCAATT TACTGCGGCG ACGGCGAGCT GCTGCACCAT
ATTCCTGAAC AACTGAGTAA ACGAGAGAGG TATACCGACA AATGGCAGCG ACGCACACAC
TCCCTCTGGC GTCACCGGGC ATGGCACGCA TCTGCCTTTA CGGGGATTTG CAACGATTTG
GCCGCCGCAT CGACCTTCGT GTGA
 
Protein sequence
MTQTESAILA HARRCAPAES CGFVVRTPEG ERYFPCVNIS GEPEAYFRMS PEDWLQAEMQ 
GEIVALVHSH PGGLPWLSEA DRRLQVQSDL PWWLVCRGTI HKFRCVPHLT GRRFEHGVTD
CYTLFRDAYH LAGIEMPDFH REDDWWRNGQ NLYLDNLEAT GLYQVPLSSA QPGDVLLCCF
GSSVPNHAAI YCGDGELLHH IPEQLSKRER YTDKWQRRTH SLWRHRAWHA SAFTGICNDL
AAASTFV