Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2107 |
Symbol | |
ID | 6067219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2300375 |
End bp | 2301118 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641601515 |
Product | NLP/P60 protein |
Protein accession | YP_001725074 |
Protein GI | 170020120 |
COG category | [R] General function prediction only |
COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000238128 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGA CAGAATCAGC GATTCTGGCG CACGCCCGGC GATGTGCGCC AGCGGAGTCG TGCGGCTTCG TGGTGAGAAC ACCGGAGGGG GAAAGATATT TTCCCTGCGT GAATATCTCC GGTGAGCCGG AGGCGTATTT CCGTATGTCG CCGGAAGACT GGCTGCAGGC AGAAATGCAG GGTGAGATTG TGGCGCTGGT CCACAGCCAC CCCGGTGGTC TGCCCTGGCT GAGTGAGGCC GACCGGCGGC TGCAGGTGCA GAGTGATTTG CCGTGGTGGC TGGTCTGCCG GGGGACGATT CATAAGTTCC GCTGTGTGCC GCATCTCACC GGGCGGCGCT TTGAGCACGG TGTGACGGAC TGTTACACAC TGTTCCGGGA TGCTTATCAT CTGGCGGGGA TTGAGATGCC GGACTTTCAT CGTGAGGATG ACTGGTGGCG TAACGGCCAG AATCTCTATC TGGATAATCT GGAGGCGACG GGGCTGTATC AGGTGCCGTT GTCATCAGCA CAACCGGGCG ATGTGCTGCT GTGCTGTTTT GGTTCATCGG TGCCGAATCA CGCCGCAATT TACTGCGGCG ACGGCGAGCT GCTGCACCAT ATTCCTGAAC AACTGAGTAA ACGAGAGAGG TATACCGACA AATGGCAGCG ACGCACACAC TCCCTCTGGC GTCACCGGGC ATGGCACGCA TCTGCCTTTA CGGGGATTTG CAACGATTTG GCCGCCGCAT CGACCTTCGT GTGA
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Protein sequence | MTQTESAILA HARRCAPAES CGFVVRTPEG ERYFPCVNIS GEPEAYFRMS PEDWLQAEMQ GEIVALVHSH PGGLPWLSEA DRRLQVQSDL PWWLVCRGTI HKFRCVPHLT GRRFEHGVTD CYTLFRDAYH LAGIEMPDFH REDDWWRNGQ NLYLDNLEAT GLYQVPLSSA QPGDVLLCCF GSSVPNHAAI YCGDGELLHH IPEQLSKRER YTDKWQRRTH SLWRHRAWHA SAFTGICNDL AAASTFV
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