Gene EcolC_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1891 
Symbol 
ID6064956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2092288 
End bp2093175 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content51% 
IMG OID641601304 
Productnucleotide excision repair endonuclease 
Protein accessionYP_001724866 
Protein GI170019912 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0501575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTACGGC GTTTAACTTC TCCGCGGCTC GAATTTGAAG CTGCGGCAAT TTATGAATAT 
CCCGAACATT TACGTTCATT CCTTAATGAC TTACCCACCC GACCAGGGGT GTATCTGTTT
CATGGTGAAA GTGACACCAT GCCGCTCTAT ATCGGCAAAA GCGTTAACAT CCGCAGCCGC
GTCCTTTCTC ATTTACGTAC CCCGGATGAA GCCGCCATGC TACGGCAATC CCGACGGATC
AGCTGGATAT GTACCGCCGG TGAAATCGGC GCTCTGCTCC TTGAAGCGCG ATTAATCAAA
GAACAACAGC CGCTGTTTAA TAAACGGTTG CGCCGCAATC GCCAGCTCTG TGCCCTGCAA
TTAAATGAAA AGCGCGTCGA TGTGGTGTAT GCCAAAGAGG TGGATTTTTC ACGAGCCCCC
AACCTGTTTG GCCTGTTTGC CAATAGGCGC GCAGCTTTGC AAGCATTGCA GACCATCGCT
GATGAACAAA AACTTTGTTA TGGCCTGTTG GGACTGGAAC CGTTAAGTCG CGGTCGTGCA
TGTTTTCGTT CAGCGCTAAA ACGTTGCGCT GGGGCGTGTT GCGGTAAAGA GAGCCATGAG
GAACATGCGC TACGCTTGCG CCAGTCTCTG GAGCGTTTGC GGGTGGTGTG TTGGCCTTGG
CAAGGGGCGG TGGCGCTGAA AGAACAGCAC CCGGAAATGA CTCAATATCA TATTATTCAA
AACTGGCTGT GGCTGGGGGC GGTTAATTCG CTGGAAGAAG CGACAACGTT AATTCGGACA
CCCGCCGGGT TTGATCACGA CGGTTATAAA ATTCTTTGTA AGCCGCTGCT TTCCGGTAAC
TATGAAATTA CTGAACTTGA TCCGGCGAAT GACCAGCGAG CCAGTTGA
 
Protein sequence
MVRRLTSPRL EFEAAAIYEY PEHLRSFLND LPTRPGVYLF HGESDTMPLY IGKSVNIRSR 
VLSHLRTPDE AAMLRQSRRI SWICTAGEIG ALLLEARLIK EQQPLFNKRL RRNRQLCALQ
LNEKRVDVVY AKEVDFSRAP NLFGLFANRR AALQALQTIA DEQKLCYGLL GLEPLSRGRA
CFRSALKRCA GACCGKESHE EHALRLRQSL ERLRVVCWPW QGAVALKEQH PEMTQYHIIQ
NWLWLGAVNS LEEATTLIRT PAGFDHDGYK ILCKPLLSGN YEITELDPAN DQRAS