Gene EcolC_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1885 
Symbol 
ID6065150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2085925 
End bp2086959 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content56% 
IMG OID641601298 
Productarginine succinyltransferase 
Protein accessionYP_001724860 
Protein GI170019906 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3138] Arginine/ornithine N-succinyltransferase beta subunit 
TIGRFAM ID[TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03244] arginine N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0106586 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGTCA TCCGTCCCGT TGAGCGATCA GATGTCTCGG CGCTGATGCA GCTTGCCAGC 
AAAACGGGCG GCGGCCTGAC GTCGCTTCCC GCCAATGAAG CCACGCTTTC GGCGCGTATC
GAAAGGGCAA TCAAAACCTG GCAAGGCGAA CTGCCCAAAA GTGAGCAGGG CTATGTGTTC
GTGCTGGAAG ATAGCGAGAC AGGCACCGTG GCGGGGATTT GTGCCATTGA GGTGGCGGTT
GGGCTGAACG ATCCCTGGTA CAACTATCGC GTCGGCACGT TGGTTCACGC CTCAAAAGAG
CTGAATGTCT ATAACGCATT GCCGACGCTG TTTCTCAGTA ACGATCACAC CGGCAGCAGC
GAGCTGTGCA CGCTGTTTCT CGACCCGGAC TGGCGCAAAG AGGGCAACGG CTATTTGCTG
TCGAAATCGC GCTTTATGTT TATGGCGGCT TTTCGCGACA AGTTTAATGA CAAAGTGGTT
GCTGAAATGC GCGGGGTGAT TGACGAACAC GGCTATTCAC CGTTCTGGCA AAGCCTCGGT
AAACGCTTCT TTTCGATGGA TTTTAGCCGC GCCGATTTTC TCTGCGGCAC CGGGCAAAAG
GCATTTATTG CAGAACTGAT GCCGAAACAT CCGATCTATA CCCACTTTTT ATCCCAGGAA
GCCCAGGACG TCATCGGTCA GGTACATCCG CAAACCGCGC CTGCCCGCGC GGTGCTGGAG
AAAGAAGGTT TTCGTTACCG CAACTATATC GACATCTTCG ACGGCGGGCC AACGCTTGAG
TGTGACATCG ACCGCGTGCG CGCCATCCGT AAAAGTCGGC TGGTGGAAGT GGCAGAAGGG
CAGCCTGCGC AGGGCGATTT TCCGGCCTGC CTGGTCGCCA ATGAAAATTA TCACCATTTC
CGCGTGGTGC TGGTGCGTAC CGATCCGGCA ACCGAGCGTT TGATATTAAC CGCCGCACAA
CTGGATGCCC TGAAATGCCA CGCCGGGGAT CGCGTTCGTC TGGTGCGCCT GTGCGCAGAG
GAGAAAACAG CATGA
 
Protein sequence
MMVIRPVERS DVSALMQLAS KTGGGLTSLP ANEATLSARI ERAIKTWQGE LPKSEQGYVF 
VLEDSETGTV AGICAIEVAV GLNDPWYNYR VGTLVHASKE LNVYNALPTL FLSNDHTGSS
ELCTLFLDPD WRKEGNGYLL SKSRFMFMAA FRDKFNDKVV AEMRGVIDEH GYSPFWQSLG
KRFFSMDFSR ADFLCGTGQK AFIAELMPKH PIYTHFLSQE AQDVIGQVHP QTAPARAVLE
KEGFRYRNYI DIFDGGPTLE CDIDRVRAIR KSRLVEVAEG QPAQGDFPAC LVANENYHHF
RVVLVRTDPA TERLILTAAQ LDALKCHAGD RVRLVRLCAE EKTA