Gene EcolC_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1881 
Symbol 
ID6068736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2081897 
End bp2082574 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content49% 
IMG OID641601294 
Producthypothetical protein 
Protein accessionYP_001724856 
Protein GI170019902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00131258 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCAAC ATTATTCAGT GTCATGGAAA AAAGGACTGG CTGCACTCTG CTTACTGGCT 
GTTGCCGGGC TTAGCGGCTG CGATCAAAAA GAGAATGCGG CGGCAAAAGT GGAATACGAC
GGACTTTCGA ACAGCCAACC GCTGCGCGTC GATGCCAATA ACCATACGGT AACCATGCTG
GTGCAAATTA ATGGTCGTTT CCTCACCGAC GACACTCGTC ACGGTATTGT GTTTAAAGAT
GGCTCCAACG GACATAAATC GCTGTTTATG GCTTATGCGA CCCCGAAAGC ATTTTATGAA
GCCCTGAAAG AGGCAGGTGG TACGCCGGGC GAAAACATGA CGATGGATAA TAAAGAAACG
ACTCATGTCA CAGGCAGCAA ACTGGATATT TCGGTCAACT GGCAAGGGGC GGCAAAAGCG
TATTCCTTCG ATGAAGTGAT TGTTGACAGT AATGGCAAGA AACTGGACAT GCGCTTTGGC
GGTAATTTAA CGGCAGCAGA AGAGAAGAAA ACGGGTTGCC TGGTGTGTCT GGATAGCTGC
CCGGTCGGCA TCGTCAGCAA TGCAACATAC ACTTATGGTG CGGTGGAAAA ACGCGGCGAA
GTGAAATTCA AAGGCAATGC CTCAGTTCTC CCGGCGGATA ACACGCTGGC AACGGTTACC
TTTAAAATCA CCGAATAA
 
Protein sequence
MSQHYSVSWK KGLAALCLLA VAGLSGCDQK ENAAAKVEYD GLSNSQPLRV DANNHTVTML 
VQINGRFLTD DTRHGIVFKD GSNGHKSLFM AYATPKAFYE ALKEAGGTPG ENMTMDNKET
THVTGSKLDI SVNWQGAAKA YSFDEVIVDS NGKKLDMRFG GNLTAAEEKK TGCLVCLDSC
PVGIVSNATY TYGAVEKRGE VKFKGNASVL PADNTLATVT FKITE