Gene EcolC_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1838 
Symbol 
ID6066211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2037433 
End bp2037681 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content47% 
IMG OID641601252 
Producthypothetical protein 
Protein accessionYP_001724814 
Protein GI170019860 
COG category[S] Function unknown 
COG ID[COG2261] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.279236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATTC TGTCATGGAT TATTTTTGGG CTTATTGCCG GTATTCTGGC GAAGTGGATC 
ATGCCAGGTA AAGATGGCGG TGGATTCTTT ATGACTATCC TGCTGGGGAT AGTCGGTGCC
GTAGTCGGCG GATGGATCAG CACGCTGTTT GGCTTTGGTA AAGTCGATGG CTTCAATTTT
GGCAGCTTCG TGGTTGCCGT TATTGGTGCG ATTGTCGTGC TATTTATCTA CAGGAAGATT
AAAAGTTAA
 
Protein sequence
MGILSWIIFG LIAGILAKWI MPGKDGGGFF MTILLGIVGA VVGGWISTLF GFGKVDGFNF 
GSFVVAVIGA IVVLFIYRKI KS