Gene EcolC_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1610 
Symbol 
ID6065121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1791092 
End bp1791979 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content31% 
IMG OID641601026 
Productglycosyl transferase family protein 
Protein accessionYP_001724596 
Protein GI170019642 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.151878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA ACATATCAGT AGTTATAATT ACATTTAATC CCAAAGTGGA AATTTTGAAG 
GAAAATATAA TTAATCTTCT AAAATCATCA ATTGTTAACA AAGTTATAAT TGTTGATAAT
GGTGCATCAA AAAGTTTAGA CGAATTAAAA AGTATTCCAG ATGTTATAAT TAAGCACCTT
GGTCAAAACC GTGGTATTGC AACGGCACAA AATGTCGGGC TAAGAATTTC TCAATCTTTA
TGCTCAAAGT ATGCGCTATT ACTGGATCAA GATTCAGAAA TTGAAACAGA TTTAGTGTCA
AAACTTCTCG ACGGTTACAT TACATTAGAA CAAAAAGGCA TCAAACTTGC CGCTGTTGGT
CCCCGACCGT TTGATTTATT TGAAAACAAA AAAATGAAAG CAAACATTCA AAGAGATATT
CAAATATTTG AGGGTTTTTC TTTGACGAAA CAGATAATCG CTTCAGGTAA GCTAATTAAT
TTGGACGTTT TAGATCAAGT CGGTTTTATG GAAGATGATT TATTTATTGA TGGTGTTGAT
CATGAATGGT GTTGGCGTGC TGGAAGATTA GGATATAAAA TTGCAATAAT AGAAAATGCT
ATTATGAAAC ATCGATTAGG CGACGCACGT GGTAATTTTT TAGGATTTAC TTATAAAATT
GGTTCGCCTA TTAGACTATA TTATCAATTT AGAAACATCT TAGTTCTAAG TCGAAGAGAT
TATGTTCCTT TGTATTGGAA ATTAAGAAAC TTGATAGGTA TTTTTCTGAA ATTTATTATA
TTTTCTCTAA AAGAGAGTGA TTCAAAAATT AGACGCTATT ATATGGTTAA AGGCTTCTGT
TCTGGTCTGA AGAAAGATAA AGGTATCATC GATAAACCAT TTAAATAA
 
Protein sequence
MEKNISVVII TFNPKVEILK ENIINLLKSS IVNKVIIVDN GASKSLDELK SIPDVIIKHL 
GQNRGIATAQ NVGLRISQSL CSKYALLLDQ DSEIETDLVS KLLDGYITLE QKGIKLAAVG
PRPFDLFENK KMKANIQRDI QIFEGFSLTK QIIASGKLIN LDVLDQVGFM EDDLFIDGVD
HEWCWRAGRL GYKIAIIENA IMKHRLGDAR GNFLGFTYKI GSPIRLYYQF RNILVLSRRD
YVPLYWKLRN LIGIFLKFII FSLKESDSKI RRYYMVKGFC SGLKKDKGII DKPFK