Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1537 |
Symbol | |
ID | 6065795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1703397 |
End bp | 1704071 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641600954 |
Product | pili assembly chaperone |
Protein accession | YP_001724524 |
Protein GI | 170019570 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAT TATTATCTTT ACTCATTTTT TCTATGGTCC TTCCTGCACA TGCCGGAATT GTTATCTACG GGACGCGCAT TATTTACCCG GCAGAAAATA AAGAAGTGAT GGTGCAGTTG ATGAACCAGG GAAACCGTTC TTCGCTGCTG CAGGCGTGGA TTGATGATGG CGATACGTCA TTACCACCAG AAAAAATTCA GGTTCCTTTC ATGTTAACGC CACCAGTGGC AAAAATAGGG GCAAATTCCG GGCAGCAAGT AAAAATCAAA ATTATGCCGA ATAAACTGCC CACTAATAAA GAAAGCATTT TTTATCTGAA TGTTCTGGAT ATTCCACCAA ATAGTCCAGA GCAAGAAGGT AAGAATGCAC TGAAGTTTGC GATGCAAAAC AGAATTAAGT TGTTTTACCG GCCAGCGGGT ATTGCTCCGG TAAATAAAGC GACATTTAAA AAATTGCTGG TAAATCGCAG TGGCAATGGT TTGGTGATAA AAAATGACTC AGCTAATTGG GTGACGATTT CGGATGTCAA AGCTAATAAT GTCAAAGTCA ATTATGAAAC TATTATGATT GCCCCCTTAG AAAGTCAGAG TGTTAATGTC AAAAGTAATA ATGCAAATAA CTGGCATCTG ACCATTATCG ATGACCATGG CAACTATATT AGTGACAAAA TTTAA
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Protein sequence | MKGLLSLLIF SMVLPAHAGI VIYGTRIIYP AENKEVMVQL MNQGNRSSLL QAWIDDGDTS LPPEKIQVPF MLTPPVAKIG ANSGQQVKIK IMPNKLPTNK ESIFYLNVLD IPPNSPEQEG KNALKFAMQN RIKLFYRPAG IAPVNKATFK KLLVNRSGNG LVIKNDSANW VTISDVKANN VKVNYETIMI APLESQSVNV KSNNANNWHL TIIDDHGNYI SDKI
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