Gene EcolC_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1518 
Symbol 
ID6066934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1677587 
End bp1678513 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content56% 
IMG OID641600937 
ProductABC transporter related 
Protein accessionYP_001724507 
Protein GI170019553 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.961531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAT TTAGCCATGT CAGCAAACTG TTCGGCGCAC AAAAAGCCGT TAACGATCTC 
AATCTCAATT TTCAGGAAGG GAGTTTTTCG GTGCTGATTG GCACATCTGG CTCCGGCAAA
TCCACCACCC TGAAAATGAT TAACCGCCTG GTGGAACATG ACAGCGGCGT GATCCGCTTT
GCCGGAGAAG AAATTCGCTC GCTGCCAGTA CTGGAGTTGC GCCGCCGGAT GGGCTATGCC
ATTCAATCTA TTGGCCTGTT CCCCCACTGG AGCGTGGCGC AAAACATCGC TACCGTGCCG
CAATTACAAA AATGGTCGCG GGCACGGATT GACGATCGTA TCGACGAATT AATGGCGCTA
CTGGGGCTGG AGTCAAATTT GCGTGAGCGT TATCCGCATC AGCTTTCCGG TGGTCAGCAG
CAACGTGTGG GAGTGGCGCG CGCACTGGCT GCCGATCCGC AAGTCTTACT GATGGATGAA
CCTTTTGGCG CACTGGACCC GGTAACGCGC GGCGCGTTGC AACAAGAGAT GACGCGCATT
CACCGTTTGC TGGGGCGCAC TATTGTGCTG GTCACTCATG ATATTGATGA GGCGCTAAGG
CTGGCAGAAC ATCTGGTATT GATGGATCAC GGTGAAGTGG TGCAGCAGGG GAATCCGCTG
ACGATGCTGA CTCGTCCGGC GAATGATTTT GTCCGCCAGT TTTTTGGACG TAGTGAACTG
GGGGTGCGCC TGCTTTCGTT ACGTAGTGTG GCGGATTACG TGCGTCGCGA AGAACGGGCA
GAAGGTGAGG CACTGGCAGA AGAGATGACG CTACGCGATG CGCTCTCCCT GTTTGTCGCG
CGGGGATGCG AGGTGCTGCC GGTGATGAAC ACGCAGGGCC AGCCTTGCGG CACGCTGCAT
TTTCAGGATC TGCTGGAGGA GGCGTAA
 
Protein sequence
MIEFSHVSKL FGAQKAVNDL NLNFQEGSFS VLIGTSGSGK STTLKMINRL VEHDSGVIRF 
AGEEIRSLPV LELRRRMGYA IQSIGLFPHW SVAQNIATVP QLQKWSRARI DDRIDELMAL
LGLESNLRER YPHQLSGGQQ QRVGVARALA ADPQVLLMDE PFGALDPVTR GALQQEMTRI
HRLLGRTIVL VTHDIDEALR LAEHLVLMDH GEVVQQGNPL TMLTRPANDF VRQFFGRSEL
GVRLLSLRSV ADYVRREERA EGEALAEEMT LRDALSLFVA RGCEVLPVMN TQGQPCGTLH
FQDLLEEA