Gene EcolC_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1406 
Symbol 
ID6067849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1538717 
End bp1539616 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content48% 
IMG OID641600825 
Producthypothetical protein 
Protein accessionYP_001724396 
Protein GI170019442 
COG category[S] Function unknown 
COG ID[COG5464] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01784] conserved hypothetical protein (putative transposase or invertase) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.286093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.84386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAT CAACAACCTC CTCCCCGCAT GATGCGGTAT TTAAAACCTT TATGTTCACA 
CCCGAAACCG CACGGGATTT TCTCGAAATA CATTTACCAG AACCACTGCG CAAGCTTTGC
AACCTGCAAA CCTTACGCCT GGAACCCACT AGTTTTATTG AAAAAAGTTT ACGCGCTTAC
TACTCGGATG TTTTGTGGTC CGTGGAAACC AGCGACGGTG ACGGCTATAT CTACTGCGTG
ATTGAACATC AAAGCTCTGC AGAAAAGAAT ATGGCTTTTC GGCTAATGCG CTATGCCACT
GCCGCCATGC AGCGTCACCT GGACAAAGGC TATGACAGAG TCCCGCTGGT GGTGCCGTTG
CTGTTTTATC ATGGCGAAAC CTCGCCTTAC CCGTACTCAC TCAACTGGCT GGATGAGTTT
GACGATCCGC AACTTGCCCG GCAGTTGTAC ACCGAAGCTT TTCCGTTGGT GGATATCACC
ATCGTACCTG ACGATGAGAT CATGCAACAT CGGCGTATAG CTCTGCTGGA ACTGATTCAA
AAGCATATTC GCGACCGCGA TTTAATCGGC ATGGTCGACA GGATCACCAC GCTTTTGGTT
AGAGGCTTCA CTAATGACAG CCAGCTACAA ACACTGTTTA ATTATCTGCT GCAATGCGGC
GATACCTCCC GTTTCACCCG TTTTATTGAG GAGATTGCCG AACGTTCACC ACTACAAAAG
GAGAGATTAA TGACTATTGC TGAACGGCTA CGGCAGGAAG GGCATCAAAT TGGCTGGCAG
GAAGGTATGC ATGAACAAGC CATTAAAATT GCTTTGCGCA TGCTGGAGCA GGGCTTTGAA
CGTGAGATTG TGCTGGCGAC AACCCAACTC ACTGATGCTG ATATTCCGAA CTGTCATTAA
 
Protein sequence
MTESTTSSPH DAVFKTFMFT PETARDFLEI HLPEPLRKLC NLQTLRLEPT SFIEKSLRAY 
YSDVLWSVET SDGDGYIYCV IEHQSSAEKN MAFRLMRYAT AAMQRHLDKG YDRVPLVVPL
LFYHGETSPY PYSLNWLDEF DDPQLARQLY TEAFPLVDIT IVPDDEIMQH RRIALLELIQ
KHIRDRDLIG MVDRITTLLV RGFTNDSQLQ TLFNYLLQCG DTSRFTRFIE EIAERSPLQK
ERLMTIAERL RQEGHQIGWQ EGMHEQAIKI ALRMLEQGFE REIVLATTQL TDADIPNCH