| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1315 |
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| Symbol | |
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| ID | 6068451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1445872 |
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| End bp | 1448517 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641600737 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001724308 |
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| Protein GI | 170019354 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACC ATTCTCTTTT TCGATTACGG ATACTTCCGT GGTGCATTGC GCTGGCAATA
TCAGGGAGTT ATAGCAGTGT CTGGGCTGAA GACGACATTC AGTTTGATTC CCGTTTTCTG
GAATTAAAAG GCGACACAAA AATTGATCTG AAGCGTTTTT CCAGCCAGGG ATATGTTGAG
CCCGGAAAAT ACAATTTACA GGTTCAACTA AATAAACAGC CATTGGCGGA AGAGTACGAT
ATTTACTGGT ATGCTGGTGA AGATGACGCG AGCAAAAGCT ATGCTTGTCT GACACCGGAA
CTGGTAGCGC AGTTTGGTTT AAAAGAAGAC GTGGCGAAAA ATCTGCAATG GAGCCACGAT
GCTAAATGCC TGAAATCCGG TCAACTGGAA GGCATGGAAA TTAAGGCTGA TTTAAGCCAG
TCCGCATTAG TCATTTCACT GCCACAGGCT TACCTCGAAT ATACTTATCC CGACTGGGAT
CCGCCTTCAC GTTGGGATGA CGGCATCTCC GGGATCGTCG CGGACTACAG CATCAACGCA
CAAACCCGGC ACGAAGAAAA TGGCGGTGAT GATAGTAACG AGATCAGCGG CAACGGGACG
GTCGGGGTTA ACCTGGGGCC ATGGCGTATG CGCGCTGACT GGCAGACCAA CTATCAACAT
ACCCGCAGTA ATGATGATGA CGAGGAATTT AGCGGCGATG ACACACAAAA AAAATGGGAG
TGGAGTCGCT ATTATGCCTG GCGGGCGTTA CCGTCATTAA AAGCCAAACT GGCGCTGGGC
GAAGATTACC TCAATTCCGA TATTTTCGAC GGTTTTAACT ATGTTGGTGG TAGTGTCAGT
ACCGATGATC AAATGTTGCC TCCCAACCTG CGCGGCTACG CGCCAGACAT TTCCGGCGTG
GCACACACCA CAGCAAAAGT GACCGTCAGC CAGATGGGGC GTGTGATTTA CGAAACGCAG
GTTCCGGCTG GACCGTTTCG TATTCAGGAT CTTGGTGATT CTGTCTCCGG TACGTTGCAT
ATTCGCATTG AAGAACAGAA CGGCCAGGTG CAGGAATATG ACATCAGCAC CGCCTCGATG
CCATACCTCA CTCGTCCAGG TCAGGTGCGC TATAAGATCA TGATGGGTCG TCCGCAAGAG
TGGGGACACC ATGTCGAGGG TGAATTTTTT TCTGGTGCTG AAGCTTCCTG GGGGATCGCT
AACGGCTGGT CGTTATATGG CGGCGCACTG GGAGATGAAA ACTATCAGTC TGCGGCGCTT
GGCGTCGGTC GCGATTTGTC TACATTCGGC GCGGTCGCGT TTGATGTTAC TCACTCGCAC
ACCAAACTGG ATAAAGACAC CGCTTATGGC AAAGGTTCGC TGGACGGTAA CTCCTTCCGT
GTGAGTTATT CCAAAGACTT TGACCAGCTC AACAGCCGCG TTACTTTTGC TGGATATCGC
TTCTCGGAAG AGAACTTTAT GACCATGAGC GAGTATCTGG ATGCCAGTGA CAGCGGAATG
GTACGCACGG GCAACGACAA AGAGATGTAC ACCGCCACTT ATAACCAGAA CTTCCGCGAT
GCGGGTGTTT CGGTTTATCT CAACTATACC CGCCATACTT ACTGGGATCG TGAGGAGCAG
ACAAACTACA ACATCATGCT CTCCCACTAT TTCAATATGG GCAGCATTCG TAATATGAGC
GTTTCCCTGA CTGGCTACCG CTACGAGTAT GACAACCGGG CGGATAAGGG CATGTACATT
TCGCTCAGTA TGCCGTGGGG CGACAACAGT ACCGTTAGCT ATAACGGCAA CTATGGCAGT
GGGACGGACA GCAGTCAGGT CGGTTATTTC AGCCGTGTCG ATGACGCGAC TCACTATCAG
TTGAACGTCG GCACCAGTGA CAAACACACC AGCGTTGACG GCTATTACAG CCATGATGGT
TCGCTGGCGC AGGTTGACCT CTGTGCGAAC TACCATGAAG GGCAATACAC CTCTGCGGGC
TTGTCGTTAC AGGGCGGCGC AACGCTTACT GCCCACGGTG GCGCACTTCA CCGTACCCAG
AATATGGGCG GGACACGCTT GTTGATTGAT GCCGATGGCG TTGCCGATGT TCCGGTAGAA
GGTAACGGTG CTGCTGTTTA TACCAATATG TTTGGTAAAG CCGTCGTTTC TGACGTCAAT
AACTATTACC GCAATCAGGC GTATATCGAC CTCAACAAAC TGCCGGAAAA CGCCGAAGCA
ACCCAGTCGG TGGTACAAGC CACGCTAACT GAAGGGGCGA TTGGCTACCG CAAATTTGCC
GTCATCAGTG GTCAAAAAGC GATGGCGGTG CTGCGTTTAC AAGACGGCAG CCATCCTCCG
TTTGGCGCAG AAGTAAAAAA TGATAACGAG CAGACAGTGG GCCTTGTCGA TGATGACGGC
AATGTTTATC TGGCTGGGGT GAAACCTGGC GAACACATGA GAGTGTTCTG GAGTGGTGTT
GCGCATTGCG ATATCAACCT GCCGGACCCG CTGCCTGCCG ATCTGTTTAA CGGCTTGTTA
CTGCCATGCC AGCATAAAGG CAATGTAGCA CCTGTCACTT CGCCGGCGGT CAAACCGGCG
ATTCAGGAAC AGACACAGCG GGTGACGCCA ACGGAACCCC CGACTTCAAT TTCAGTAAAC
CAGTAA
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| Protein sequence | MPDHSLFRLR ILPWCIALAI SGSYSSVWAE DDIQFDSRFL ELKGDTKIDL KRFSSQGYVE
PGKYNLQVQL NKQPLAEEYD IYWYAGEDDA SKSYACLTPE LVAQFGLKED VAKNLQWSHD
AKCLKSGQLE GMEIKADLSQ SALVISLPQA YLEYTYPDWD PPSRWDDGIS GIVADYSINA
QTRHEENGGD DSNEISGNGT VGVNLGPWRM RADWQTNYQH TRSNDDDEEF SGDDTQKKWE
WSRYYAWRAL PSLKAKLALG EDYLNSDIFD GFNYVGGSVS TDDQMLPPNL RGYAPDISGV
AHTTAKVTVS QMGRVIYETQ VPAGPFRIQD LGDSVSGTLH IRIEEQNGQV QEYDISTASM
PYLTRPGQVR YKIMMGRPQE WGHHVEGEFF SGAEASWGIA NGWSLYGGAL GDENYQSAAL
GVGRDLSTFG AVAFDVTHSH TKLDKDTAYG KGSLDGNSFR VSYSKDFDQL NSRVTFAGYR
FSEENFMTMS EYLDASDSGM VRTGNDKEMY TATYNQNFRD AGVSVYLNYT RHTYWDREEQ
TNYNIMLSHY FNMGSIRNMS VSLTGYRYEY DNRADKGMYI SLSMPWGDNS TVSYNGNYGS
GTDSSQVGYF SRVDDATHYQ LNVGTSDKHT SVDGYYSHDG SLAQVDLCAN YHEGQYTSAG
LSLQGGATLT AHGGALHRTQ NMGGTRLLID ADGVADVPVE GNGAAVYTNM FGKAVVSDVN
NYYRNQAYID LNKLPENAEA TQSVVQATLT EGAIGYRKFA VISGQKAMAV LRLQDGSHPP
FGAEVKNDNE QTVGLVDDDG NVYLAGVKPG EHMRVFWSGV AHCDINLPDP LPADLFNGLL
LPCQHKGNVA PVTSPAVKPA IQEQTQRVTP TEPPTSISVN Q
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