Gene EcolC_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1099 
Symbol 
ID6064988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1196912 
End bp1197499 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content51% 
IMG OID641600515 
Productneutral amino-acid efflux protein 
Protein accessionYP_001724093 
Protein GI170019139 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0442418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.231568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCGA CCCTTTTAAG TGCTTTTTGG ACTTACACCC TGATTACCGC TATGACGCCA 
GGACCGAACA ATATTCTCGC CCTTAGCTCT GCTACGTCGC ATGGATTTCG TCAAAGTACC
CGCGTGCTGG CAGGGATGAG TCTGGGATTT TTGATTGTGA TGTTACTGTG TGCGGGCATT
TCATTTTCAC TGGCAGTGAT TGACCCGGCA GCGGTACACC TTTTGAGTTG GGCGGGGGCG
GCATATATTG TCTGGCTGGC GTGGAAAATC GCCACCAGCC CAACAAAGGA AGACGGACTT
CAGGCAAAAC CAATCAGCTT TTGGGCCAGC TTTGCTTTGC AGTTTGTGAA CGTCAAAATC
ATTTTGTACG GTGTTACGGC ACTGTCGACG TTTGTTCTGC CGCAAACACA GGCGTTAAGC
TGGGTAGTTG GCGTCAGCGT TTTGCTGGCG ATGATTGGGA CGTTTGGCAA TGTGTGCTGG
GCGCTGGCGG GGCATCTGTT TCAGCGATTG TTTCGCCAGT ATGGTCGCCA GTTAAATATC
GTGCTTGCCC TGTTGCTGGT CTATTGCGCG GTACGCATTT TCTATTAA
 
Protein sequence
MTPTLLSAFW TYTLITAMTP GPNNILALSS ATSHGFRQST RVLAGMSLGF LIVMLLCAGI 
SFSLAVIDPA AVHLLSWAGA AYIVWLAWKI ATSPTKEDGL QAKPISFWAS FALQFVNVKI
ILYGVTALST FVLPQTQALS WVVGVSVLLA MIGTFGNVCW ALAGHLFQRL FRQYGRQLNI
VLALLLVYCA VRIFY