Gene EcolC_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0997 
Symbol 
ID6067723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1083081 
End bp1084538 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content56% 
IMG OID641600405 
ProductPTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC 
Protein accessionYP_001723993 
Protein GI170019039 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.013891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAA ATTATGCGGC GCTGGCACGC TCGGTGATAG CGGCACTGGG CGGCGTTGAT 
AACATCTCGG CGGTCACGCA CTGTATGACG CGGTTGCGCT TTGTTATCAA AGATGATGCG
CTTATCGACA GCCCGACGTT AAAAACCATC CCCGGCGTGC TCGGCGTGGT ACGTAGTGAC
AACCAGTGTC AGGTGATTAT CGGCAATACC GTTTCACAAG CCTTTCAGGA AGTCGTCAGC
CTGCTGCCGG GAGATATGCA GCCCGCACAG CCCGTGGGTA AACCCAAACT CACGCTACGT
CGCATTGGTG CGGGGATCCT CGATGCGCTG ATCGGCACCA TGTCACCGCT GATCCCGGCG
ATTATCGGCG GATCGATGGT CAAACTGCTG GCAATGATCC TCGAGATGAG CGGCGTGCTG
ACAAAAGGAT CGCCGACCTT AACCATTCTG AATGTGATTG GTGACGGTGC TTTCTTCTTC
CTGCCGCTGA TGGTCGCGGC ATCTGCCGCC ATCAAATTTA AAACCAATAT GTCGCTGGCG
ATTGCCATCG CGGGTGTGCT GGTACATCCG AGTTTTATTG AACTGATGGC GAAAGCGGCC
CAGGGTGAAC ATGTCGAATT TGCCCTGATT CCGGTCACCG CGGTGAAATA CACCTACACG
GTGATCCCGG CGCTGGTGAT GACCTGGTGC CTGTCATATA TCGAACGCTG GGTGGACAGC
ATTACACCGG CGGTGACCAA AAACTTCCTC AAACCAATGC TGATTGTGTT GATTGCCGCA
CCGCTGGCAA TCCTGCTGAT TGGCCCGATT GGTATCTGGA TCGGTAGCGC CATTTCGGCG
CTGGTTTACA CCATTCATGG TTATCTGGGC TGGCTTTCAG TCGCCATTAT GGGCGCGCTG
TGGCCTCTGC TGGTAATGAC CGGGATGCAC CGCGTCTTTA CGCCAACCAT CATTCAGACC
ATTGCCGAAA CCGGCAAAGA AGGGATGGTC ATGCCGTCAG AGATCGGCGC TAACCTGTCG
CTGGGCGGTT CATCACTGGC AGTGGCGTGG AAAACGAAAA ACCCGGAACT GCGTCAGACG
GCGCTGGCTG CGGCGGCATC AGCCATTATG GCGGGGATTT CCGAACCGGC GTTATATGGC
GTGGCGATCC GCCTGAAACG TCCGCTTATC GCCAGTCTTA TCAGCGGTTT TATTTGCGGC
GCGGTTGCCG GTATGGCGGG GCTTGCCAGC CACTCAATGG CAGCGCCGGG GCTATTTACC
AGCGTGCAGT TCTTCGATCC GGCGAATCCA ATGAGCATCG TCTGGGTGTT CGCGGTCATG
GCGCTGGCGG TGGTGCTGTC GTTTATCCTC ACACTGTTGC TCGGCTTTGA GGATATTCCT
GTTGAGGAAG CGGCTGCCCA GGCGCGAAAG TATCAGAGCG TACAACCGAC CGTCGCCAAA
GAAGTAAGTC TTAATTGA
 
Protein sequence
MAKNYAALAR SVIAALGGVD NISAVTHCMT RLRFVIKDDA LIDSPTLKTI PGVLGVVRSD 
NQCQVIIGNT VSQAFQEVVS LLPGDMQPAQ PVGKPKLTLR RIGAGILDAL IGTMSPLIPA
IIGGSMVKLL AMILEMSGVL TKGSPTLTIL NVIGDGAFFF LPLMVAASAA IKFKTNMSLA
IAIAGVLVHP SFIELMAKAA QGEHVEFALI PVTAVKYTYT VIPALVMTWC LSYIERWVDS
ITPAVTKNFL KPMLIVLIAA PLAILLIGPI GIWIGSAISA LVYTIHGYLG WLSVAIMGAL
WPLLVMTGMH RVFTPTIIQT IAETGKEGMV MPSEIGANLS LGGSSLAVAW KTKNPELRQT
ALAAAASAIM AGISEPALYG VAIRLKRPLI ASLISGFICG AVAGMAGLAS HSMAAPGLFT
SVQFFDPANP MSIVWVFAVM ALAVVLSFIL TLLLGFEDIP VEEAAAQARK YQSVQPTVAK
EVSLN