Gene EcolC_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0953 
Symbol 
ID6068315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1040762 
End bp1041244 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content47% 
IMG OID641600361 
ProductCRISPR-associated Cse2 family protein 
Protein accessionYP_001723949 
Protein GI170018995 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.476503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG AAATTGATGC AATGGCTTTA TATCGAGCCT GGCAACAACT GGATAACGGA 
GCATGTGCGC AAATTAGACG TGTTTCAGAA CCTGATGAAT TACGCGATAT CCCTGCGTTT
TATAGGCTGG TGCAACCTTT TGGTTGGGAA AACCCACGTC ACCAGCAGGC TCTTTTACGC
ATGGTGTTTT GCCTGAGCGC AGGAAAGAAT GTCATCCGAC ATCAGGACAA AAAACCGGAG
CAAACAACAG GTATCTCGTT GGGAAGAGCT TTAGCCAATA GTGGAAGAAT TAACGAGCGC
CGTATCTTTC AATTAATTCG GGCTGACAGA ACAGCCGATA TGGTCCAGTT ACGTCGATTG
CTTGCTCACG CCGAACCCGT ACTTGACTGG CCATTAATGG CCAGGATGTT GACCTGGTGG
GGAAAGCGCG AACGCCAGCA ACTTCTGGAA GATTTTGTAT TGACCACAAA CAAAAATGCG
TAA
 
Protein sequence
MADEIDAMAL YRAWQQLDNG ACAQIRRVSE PDELRDIPAF YRLVQPFGWE NPRHQQALLR 
MVFCLSAGKN VIRHQDKKPE QTTGISLGRA LANSGRINER RIFQLIRADR TADMVQLRRL
LAHAEPVLDW PLMARMLTWW GKRERQQLLE DFVLTTNKNA