| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0934 |
|---|
| Symbol | |
|---|
| ID | 6068495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 1014123 |
|---|
| End bp | 1014995 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641600342 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001723930 |
|---|
| Protein GI | 170018976 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1512] Beta-propeller domains of methanol dehydrogenase type |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000566742 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTATT TCATACTAAT GTTCACTTTC GTATGTTCCT TTGTTGCAGC CCAACCAACT
ATTGTCCCAC AATTACAGCA ACAAGTTACG GATCTTACGA GTAGCTTAAA CTCACAAGAA
AAGAAAGAAC TGACGCACAA GTTAGAATCT ATTTTCAATA ATACCCAAGT GCAAATTGCT
GTATTAATTG TTTCCACAAC CAAAGATGAG ACAATTGAAC AATATGCTAC AAGAGTTTTT
GACAATTGGC GTTTAGGAGA TGCCAAACGT AATGATGGGA TACTGATCGT TGTTGCCTGG
TCGGATCGCA CTGTCCGCAT CCAGGTAGGT TTTGGGCTGG AAGAAAAGGT AACCGATGCT
CTGGCTGGAG ATATCATCCG TAGCAACATG ATACCCGCAT TTAAACAACA AAAATTAGCT
CAGGGATTAG AGCTAGCTAT AAACGCTTTG AATAACCAAC TCACTTCACA ACACCAATAT
CCGACTAATC CTTCAGAAAG TGAATCAGCG TCTTCCAGTG ATCATTATTA CTTTGCTATT
TTTTGGGTAT TTGCAGTGAT GTTCTTCCCT TTCTGGTTTT TTCATCAAGG CAGTAATTTT
TGTCGCGCAT GTAAAAGTGG AGTCTGTATT TCAGCAATCT ATCTTTTAGA TTTATTCCTG
TTCTCCGATA AAATTTTTTC CATTGCTGTA TTTTCCTTCT TTTTTACTTT CACCATATTT
ATGGTCTTTA CCTGTTTATG TGTACTTCAG AAAAGAGCAT CTGGTAGAAG TTATCATTCA
GACAACAGCG GTTCCGCTGG AGGCTCAGAT AGCGGCGGAT TTAGCGGCGG GGGCGGTTCT
TCTGGAGGTG GCGGCGCATC CGGCCGCTGG TAA
|
|---|
| Protein sequence | MRYFILMFTF VCSFVAAQPT IVPQLQQQVT DLTSSLNSQE KKELTHKLES IFNNTQVQIA
VLIVSTTKDE TIEQYATRVF DNWRLGDAKR NDGILIVVAW SDRTVRIQVG FGLEEKVTDA
LAGDIIRSNM IPAFKQQKLA QGLELAINAL NNQLTSQHQY PTNPSESESA SSSDHYYFAI
FWVFAVMFFP FWFFHQGSNF CRACKSGVCI SAIYLLDLFL FSDKIFSIAV FSFFFTFTIF
MVFTCLCVLQ KRASGRSYHS DNSGSAGGSD SGGFSGGGGS SGGGGASGRW
|
|---|
| |