Gene EcolC_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0892 
Symbol 
ID6064623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp957941 
End bp958264 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content55% 
IMG OID641600295 
Producthypothetical protein 
Protein accessionYP_001723888 
Protein GI170018934 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCTT CCCTGAAGAA TCAACAAGGC TTTAGCCTGC CGGAGGTAAT GTTGGCGATG 
GTGTTGATGG TGATGATTGT CACTGCGTTA TCGGGTTTCC AGCGAACATT AATGAACAGT
CTTGCCAGCA GAAACCAGTA CCAACAGCTC TGGCGGCATG GCTGGCAGCA AACGCAACTG
CGCGCGATTT CGCCACCTGC CAACTGGCAG GTCAACCGAA TGCAGACATC GCAGGCGGGA
TGTGTCAGCA TCAGCGTTAC GCTAGTTTCA CCCGGGGGCA GAGAAGGCGA GATGACCCGC
CTGCATTGCC CGAATCGTCA GTAG
 
Protein sequence
MSASLKNQQG FSLPEVMLAM VLMVMIVTAL SGFQRTLMNS LASRNQYQQL WRHGWQQTQL 
RAISPPANWQ VNRMQTSQAG CVSISVTLVS PGGREGEMTR LHCPNRQ