Gene EcolC_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0828 
Symbol 
ID6065301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp891424 
End bp892203 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content54% 
IMG OID641600233 
Productputative selenate reductase subunit YgfM 
Protein accessionYP_001723827 
Protein GI170018873 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID[TIGR03312] probable selenate reductase, FAD-binding subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAC AATTTTTCAG GCCCGACTCT GTCGAACAGG CGCTGGAACT GAAGCGCCGC 
TACCAGGATG AAGCCGTCTG GTTCGCCGGA GGCAGCAAAC TCAATGCTAC ACCAACCCGT
ACCGATAAAA AGATTGCCAT TTCCTTACAG GATCTGGAAC TGGACTGGGT TGACTGGGAT
AACGGTGCAC TGCGGATTGG TGCAATGTCT CGCTTGCAGC CACTGCGTGA TGCGCGATTT
ATTCCTGCAG CACTGCGTGA AGCTCTCGGT TTTGTTTACT CACGCCATGT TCGTAATCAG
TCGACCATTG GTGGTGAAAT CGCCGCCCGG CAGGAAGAGT CAGTGCTGCT TCCCGTCCTG
CTGGCACTGG ATGCTGAACT GGTTTTTGGC AACGGCGAAA CGCTGTCAAT CGAGGACTAC
CTGGCCTGCC CATGCGATCG CCTGCTAACC GAAATTATCA TTAAAGATCC GTATCGCACC
TGTGCGACCC GGAAAATTAG CCGTTCTCAG GCAGGTTTAA CCGTCGTGAC GGCAGCCGTT
GCAACGACAG ACCACGACGG TATGCGAATT GCGCTGGATG GCGTCGCCAG TAAAGCACTG
CGTCTGCACG ATGTCGAAAA ACAAAATCTG GAAGGCAATT CACTTGAACA GGCTGTCGCC
AACGCCATTT TCCCGCAGGA AGATTTGCGG GGCAGCGTGG CCTATAAACG CTATATCACG
GGAGTTCTGG TAGCCGACCT GTATGCCGAC TGCCAACAGG CTGGGGAGGA AGCCGTATGA
 
Protein sequence
MIEQFFRPDS VEQALELKRR YQDEAVWFAG GSKLNATPTR TDKKIAISLQ DLELDWVDWD 
NGALRIGAMS RLQPLRDARF IPAALREALG FVYSRHVRNQ STIGGEIAAR QEESVLLPVL
LALDAELVFG NGETLSIEDY LACPCDRLLT EIIIKDPYRT CATRKISRSQ AGLTVVTAAV
ATTDHDGMRI ALDGVASKAL RLHDVEKQNL EGNSLEQAVA NAIFPQEDLR GSVAYKRYIT
GVLVADLYAD CQQAGEEAV