Gene EcolC_0791 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0791 
Symbol 
ID6065086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp847966 
End bp848751 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID641600195 
Productmethylmalonyl-CoA decarboxylase 
Protein accessionYP_001723790 
Protein GI170018836 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTATC AGTATGTTAA CGTTGTCACT ATCAACAAAG TGGCGGTCAT TGAGTTTAAC 
TATGGCCGCA AACTTAATGC CTTAAGTAAA GTCTTTATTG ATGATCTTAT GCAGGCGTTA
AGCGATCTCA ACCGGCCGGA AATTCGCTGT ATCATTTTGC GCGCGCCGAG TGGATCCAAA
GTCTTCTCCG CAGGTCACGA TATTCACGAA CTGCCGTCTG GCGGTCGCGA TCCGCTCTCC
TATGATGATC CATTGCGTCA AATCACCCGC ATGATCCAAA AATTCCCGAA ACCGATCATT
TCGATGGTGG AAGGTAGTGT TTGGGGTGGC GCATTTGAAA TGATCATGAG TTCCGATCTG
ATCATCGCCG CCAGTACCTC AACCTTCTCA ATGACGCCTG TAAACCTCGG CGTCCCGTAT
AACCTGGTCG GCATTCACAA CCTGACCCGC GACGCGGGCT TCCACATTGT CAAAGAGCTG
ATTTTTACCG CTTCGCCAAT CACCGCCCAG CGCGCGCTGG CTGTCGGCAT CCTCAACCAT
GTTGTGGAAG TGGAAGAACT GGAAGATTTC ACCTTACAAA TGGCGCACCA CATCTCTGAG
AAAGCGCCGT TAGCCATTGC CGTTATCAAA GAAGAGCTGC GTGTACTGGG CGAAGCACAC
ACCATGAACT CCGATGAATT TGAACGTATT CAGGGGATGC GCCGCGCGGT TTATGACAGC
GAAGATTACC AGGAAGGGAT GAACGCTTTC CTCGAAAAAC GTAAACCTAA TTTCGTTGGT
CATTAA
 
Protein sequence
MSYQYVNVVT INKVAVIEFN YGRKLNALSK VFIDDLMQAL SDLNRPEIRC IILRAPSGSK 
VFSAGHDIHE LPSGGRDPLS YDDPLRQITR MIQKFPKPII SMVEGSVWGG AFEMIMSSDL
IIAASTSTFS MTPVNLGVPY NLVGIHNLTR DAGFHIVKEL IFTASPITAQ RALAVGILNH
VVEVEELEDF TLQMAHHISE KAPLAIAVIK EELRVLGEAH TMNSDEFERI QGMRRAVYDS
EDYQEGMNAF LEKRKPNFVG H