| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0653 |
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| Symbol | |
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| ID | 6064803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 706047 |
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| End bp | 708545 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641600060 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001723656 |
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| Protein GI | 170018702 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.802851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAA AATTAAAATT AACCACAATA AGCGAATTGA TTAAAAATAT TTATTGTTCA
TTATCCGTTA TCATCATTGG TTGTGCGTCA GCTTATGCCG TTGAATTCAA CAAAGATTTA
ATCGAAGCCG AAGATCGTGA AAACGTTAAC CTTTCCCAAT TTGAAACTGA TGGCCAATTA
CCCGTCGGCA AATATTCACT AAGCACTCTG ATTAATAATA AGAGGACGCC AATCCACCTT
GACCTCCAAT GGGTATTAAT TGATAACCTA ACTGCAGTTT GCGTGACACC AGAGCAATTA
ACATTATTAG GCTTTACTGA TGAGATTATT GAAGAGGCTC AGCAAAACCT GATCGATGGT
TGTTACCCTA TCGAAAAAGA AAAACAAATT ACAACTTATC TCGATAAAGG GAAAATGCAA
TTATCCATAT CTGCACCTCA GGCATGGTTA AAATACAAAG ATGCAAACTG GACGCCTCCT
GAACTTTGGG ATCATGGTAT TGCTGGGGCA TTTCTTGACT ACAATTTATA TGCCTCTCAT
TATGCACCAC ATCAGGGCGA TAATTCACAA AATATAAGTT CCTATGGGCA GGCTGGGGTT
AATCTTGGGG CCTGGCGCCT GCGTACTGAT TACCAGTACG ATCAGTCATT TAACAATGGC
AAAAGCCAGG CGAACAACCT GGATTTTCCG CGTATTTATT TGTTTCGCCC AATCCCAGCA
ATTAATGCAA AACTAACTAT AGGTCAATAC GATACTGAAT CCTCTATTTT CGACTCTTTC
CATTTTTCTG GCGTTTCGTT GAAAAGCGAT GAGAATATGT TGCCGCCTGA TCTACGTGGT
TACGCACCGC AAATCACGGG TGTTGCACAA ACGAATGCAA AGGTCACTGT CTCACAGAAC
AACCGTATTA TTTATCAAGA AAACGTTCCT CCAGGCCCAT TTTCTATTAC CAATTTATTC
AATACATTAC AGGGGCAACT GGACGTCAAG GTTGAAGAAG AGGACGGGCG CGTCACGCAA
TGGCAAGTTG CATCTAATAG CATTCCTTAT CTGACGCGTA AAGGGCAGAT TCGCTACACT
ACTGCAATGG GGAAACCGAC CAGCGTTGGC GGCGATTCCT TACAACAGCC CTTCTTCTGG
ACCGGTGAAT TCTCATGGGG TTGGCTGAAC AATGTATCCC TGTATGGTGG TTCAGTATTA
ACAAACCGTG ATTATCAATC CCTGGCTACC GGAGTTGGTT TTAACCTTAA CTCGTTGGGC
TCATTATCCT TTGATGTCAC GCGATCTGAT GCTCAGTTAC ATAATCAGAA TAAAGAAACG
GGTTATAGCT ACCGTGCTAA CTATTCAAAA CGTTTTGAAT CTACCGGTAG CCAGCTCACT
TTCGCTGGCT ACCGTTTCTC TGATAAAAAC TTTGTGTCGA TGAATGAATA TATCAATGAC
ACTAACCATT ACACGAATTA TCAGAATGAA AAAGAGAGTT ATATTGTCAC GTTTAACCAG
TATCTTGAAT CATTGAGATT AAATACATAC GTAAGTCTGG CTCGTAATAC TTACTGGGAC
GCCAGCAGTA ATGTGAATTA TTCATTATCA CTTAGCCGCG ATTTTGATAT CGGCCCATTA
AAAAACGTAT CCACCTCACT AACATTTAGC CGAATAAACT GGGAAGATGA CAACCAGGAT
CAACTGTACC TAAATATTTC AATTCCCTGG GGAACCAGTA GAACATTGAG CTATGGTATG
CAACGAAATC AGGATAACAA CATTTCGCAT ACTGCTTCGT GGTATGACTC TTCCGATCGA
AATAATTCCT GGAGCGTTTC TGCTTCAGGC GACAATGACG AATTTAAAGA TATGGAGGCG
TCACTGCGCG CCAGTTATCA GCATAATACC GAGAACGGTC GTCTCTATCT CTCCGGTACA
TCACAGCGGG ACAGCTACTA TTCTCTGAAT GCCAGTTGGA ACGGTTCATT CACTGCAACT
CGCCACGGCG CCGCTTTCCA TGACTATAGT GGTAGTGCTG ACTCGCGTTT TATGATCGAC
GCAGACGGCG CTGAAGATAT TCCGTTGAAT AATAAACGCG CGGTAACTAA TCGGTATGGC
ATCGGAGTTA TTCCATCAGT CAGCAGTTAC ATAACAACAT CATTAAGCGT TGATACCCGA
AATCTTCCAG AAAATGTGGA TATCGAAAAC TCGGTTATCA CCACCACCTT AACCGAAGGT
GCTATTGGCT ACGCCAAACT TGATACCCGC AAGGGCTATC AAATCATGGG GGTTATTCGC
CTGGCAGATG GTAGTCACCC ACCACTGGGG ATTAGCGTAA AAGATGAAAC CAGCCACAAA
GAATTAGGAC TTGTTGCTGA TGGCGGCTTT GTATACCTCA ACGGCATTCA GGATGACAGC
AAACTTACTT TACGCTGGGG TGACAAATCT TGCTTTATTC AACCACCCAA GAGCAGCAAC
TTAACCACCG GAACGGTTAT TTTACCGTGT ATTAGCTAA
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| Protein sequence | MYKKLKLTTI SELIKNIYCS LSVIIIGCAS AYAVEFNKDL IEAEDRENVN LSQFETDGQL
PVGKYSLSTL INNKRTPIHL DLQWVLIDNL TAVCVTPEQL TLLGFTDEII EEAQQNLIDG
CYPIEKEKQI TTYLDKGKMQ LSISAPQAWL KYKDANWTPP ELWDHGIAGA FLDYNLYASH
YAPHQGDNSQ NISSYGQAGV NLGAWRLRTD YQYDQSFNNG KSQANNLDFP RIYLFRPIPA
INAKLTIGQY DTESSIFDSF HFSGVSLKSD ENMLPPDLRG YAPQITGVAQ TNAKVTVSQN
NRIIYQENVP PGPFSITNLF NTLQGQLDVK VEEEDGRVTQ WQVASNSIPY LTRKGQIRYT
TAMGKPTSVG GDSLQQPFFW TGEFSWGWLN NVSLYGGSVL TNRDYQSLAT GVGFNLNSLG
SLSFDVTRSD AQLHNQNKET GYSYRANYSK RFESTGSQLT FAGYRFSDKN FVSMNEYIND
TNHYTNYQNE KESYIVTFNQ YLESLRLNTY VSLARNTYWD ASSNVNYSLS LSRDFDIGPL
KNVSTSLTFS RINWEDDNQD QLYLNISIPW GTSRTLSYGM QRNQDNNISH TASWYDSSDR
NNSWSVSASG DNDEFKDMEA SLRASYQHNT ENGRLYLSGT SQRDSYYSLN ASWNGSFTAT
RHGAAFHDYS GSADSRFMID ADGAEDIPLN NKRAVTNRYG IGVIPSVSSY ITTSLSVDTR
NLPENVDIEN SVITTTLTEG AIGYAKLDTR KGYQIMGVIR LADGSHPPLG ISVKDETSHK
ELGLVADGGF VYLNGIQDDS KLTLRWGDKS CFIQPPKSSN LTTGTVILPC IS
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