Gene EcolC_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0587 
Symbol 
ID6066146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp632550 
End bp633881 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content51% 
IMG OID641599993 
Productserine transporter 
Protein accessionYP_001723590 
Protein GI170018636 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00814] serine transporter 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTG CATCGAATAA AGGCGTCATT GCAGACGCTT CGACCCCGGC GGGTCGTGCT 
GGAATGAGTG AGAGCGAGTG GCGAGAAGCG ATCAAATTCG ACAGTACTGA CACCGGCTGG
GTGATTATGA GTATCGGGAT GGCGATTGGC GCGGGGATTG TTTTTCTCCC GGTGCAGGTC
GGTTTGATGG GATTGTGGGT ATTTTTGCTC TCATCGGTGA TTGGTTACCC GGCAATGTAT
CTGTTTCAGC GGTTGTTTAT TAATACGCTG GCAGAATCAC CAGAATGTAA AGATTACCCG
AGTGTCATTA GCGGTTATTT AGGTAAAAAC TGGGGCATCC TGTTAGGTGC GCTCTATTTC
GTAATGCTGG TGATTTGGAT GTTCGTCTAT TCCACCGCCA TCACCAACGA TAGTGCTTCC
TACCTGCATA CCTTCGGCGT GACGGAAGGG TTGCTGTCAG ACAGTCCCTT TTATGGTCTG
GTACTGATTT GCATTCTGGT GGCGATCTCC TCACGCGGCG AGAAATTGTT ATTCAAAATT
TCGACCGGCA TGGTGCTGAC CAAGCTGCTG GTGGTCGCGG CGCTGGGCGT GTCGATGGTG
GGAATGTGGC ATCTGTATAA CGTCGGTTCG CTACCGCCGC TGGGGCTGCT GGTGAAAAAC
GCCATTATTA CGCTGCCGTT TACCCTGACG TCGATTCTGT TTATTCAGAC GTTAAGCCCG
ATGGTGATCT CTTATCGCTC GCGGGAAAAA TCCATTGAAG TGGCGCGGCA TAAAGCATTG
CAGGCAATGA ATATCGCGTT TGGCATTTTG TTTGTCACCG TCTTTTTCTA CGCCGTGTCG
TTCACGCTGG CGATGGGACA TGACGAAGCG GTAAAAGCCT ACGAGCAGAA TATTTCCGCG
CTGGCGATTG CCGCACAGTT TATTAGCGGT GACGGCGCAG CGTGGGTGAA AGTGGTCAGC
GTCATTCTCA ATATCTTTGC TGTCATGACT GCATTCTTTG GCGTCTATTT AGGCTTTCGC
GAAGCAACGC AAGGGATCGT AATGAACATC CTGCGTCGCA AGATGCCTGC CGAGAAGATT
AACGAAAATC TTGTTCAGCG CGGCATCATG ATTTTCGCCA TTTTGCTGGC CTGGAGCGCC
ATCGTACTGA ACGCACCGGT GTTGAGCTTC ACCTCTATCT GTAGCCCGAT TTTCGGCATG
GTAGGGTGCC TGATCCCGGC GTGGCTGGTT TACAAAGTAC CGGCATTGCA CAAATACAAA
GGGATGTCTC TGTACCTGAT TATCGTCACT GGTTTGTTGC TTTGTGTTTC TCCGTTCCTG
GCATTTTCTT GA
 
Protein sequence
MEIASNKGVI ADASTPAGRA GMSESEWREA IKFDSTDTGW VIMSIGMAIG AGIVFLPVQV 
GLMGLWVFLL SSVIGYPAMY LFQRLFINTL AESPECKDYP SVISGYLGKN WGILLGALYF
VMLVIWMFVY STAITNDSAS YLHTFGVTEG LLSDSPFYGL VLICILVAIS SRGEKLLFKI
STGMVLTKLL VVAALGVSMV GMWHLYNVGS LPPLGLLVKN AIITLPFTLT SILFIQTLSP
MVISYRSREK SIEVARHKAL QAMNIAFGIL FVTVFFYAVS FTLAMGHDEA VKAYEQNISA
LAIAAQFISG DGAAWVKVVS VILNIFAVMT AFFGVYLGFR EATQGIVMNI LRRKMPAEKI
NENLVQRGIM IFAILLAWSA IVLNAPVLSF TSICSPIFGM VGCLIPAWLV YKVPALHKYK
GMSLYLIIVT GLLLCVSPFL AFS