Gene EcolC_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0334 
Symbol 
ID6065603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp386339 
End bp387217 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content53% 
IMG OID641599733 
Productputative hydrolase 
Protein accessionYP_001723339 
Protein GI170018385 
COG category[R] General function prediction only 
COG ID[COG1735] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.501947 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTG ATCCGACGGG TTACACCCTC GCCCATGAGC ATCTGCATAT TGATCTCTCC 
GGCTTTAAAA ACAACGTGGA CTGCCGCCTT GATCAGTATG CGTTCATTTG CCAGGAGATG
AACGACCTGA TGACCCGGGG CGTGCGTAAT GTGATTGAGA TGACCAACCG TTACATGGGG
CGCAATGCGC AATTTATGCT TGATGTAATG CGCGAGACGG GGATCAACGT GGTGGCCTGT
ACCGGTTATT ACCAGGACGC GTTTTTCCCG GAACATGTGG CGACCCGCAG CGTGCAGGAA
CTGGCGCAGG AGATGGTCGA TGAAATTGAA CAGGGTATCG ATGGCACGGA GCTGAAAGCC
GGGATCATCG CGGAGATCGG CACCAGCGAA GGAAAGATTA CGCCGCTGGA AGAGAAGGTA
TTTATTGCCG CTGCGCTGGC GCATAACCAG ACCGGACGCC CGATCTCCAC GCATACGTCG
TTCAGCACGA TGGGGCTGGA GCAACTGGCG TTGCTACAAG CCCACGGGGT TGATCTTTCG
CGCGTCACCG TTGGTCACTG CGATCTGAAA GACAACCTCG ACAACATTTT GAAGATGATC
GATCTCGGCG CGTACGTGCA GTTCGACACC ATCGGCAAGA ACAGTTACTA CCCGGACGAA
AAGCGTATTG CGATGCTTCA TGCGCTACGC GACCGTGGGT TGCTGAACCG CGTCATGCTG
TCGATGGATA TTACGCGCCG CTCCCATTTA AAAGCCAACG GTGGTTATGG CTATGACTAT
TTACTAACCA CCTTTATTCC GCAATTGCGC CAGTCAGGAT TCAGTCAGGC CGATGTGGAT
GTGATGTTAC GTGAAAATCC CTCTCAATTT TTCCAATAA
 
Protein sequence
MSFDPTGYTL AHEHLHIDLS GFKNNVDCRL DQYAFICQEM NDLMTRGVRN VIEMTNRYMG 
RNAQFMLDVM RETGINVVAC TGYYQDAFFP EHVATRSVQE LAQEMVDEIE QGIDGTELKA
GIIAEIGTSE GKITPLEEKV FIAAALAHNQ TGRPISTHTS FSTMGLEQLA LLQAHGVDLS
RVTVGHCDLK DNLDNILKMI DLGAYVQFDT IGKNSYYPDE KRIAMLHALR DRGLLNRVML
SMDITRRSHL KANGGYGYDY LLTTFIPQLR QSGFSQADVD VMLRENPSQF FQ