Gene EcolC_0262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0262 
SymbollivF 
ID6067868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp300037 
End bp300750 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content57% 
IMG OID641599661 
Productleucine/isoleucine/valine transporter ATP-binding subunit 
Protein accessionYP_001723268 
Protein GI170018314 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAG TCATGTTGTC CTTTGACAAA GTCAGCGCCC ACTACGGCAA AATCCAGGCG 
CTGCATGAGG TGAGCTTGCA TATCAATCAG GGCGAGATTG TCACGCTGAT TGGCGCGAAC
GGGGCGGGGA AAACCACCTT GCTTGGTACG TTATGCGGCG ATCCGCGCGC CACCAGCGGG
CGAATTGTGT TTGATGATAA AGACATTACC GACTGGCAGA CGGCGAAAAT CATGCGCGAA
GCGGTAGCGA TTGTCCCGGA AGGGCGTCGC GTCTTCTCGC GGATGACGGT GGAAGAGAAC
CTGGCGATGG GCGGCTTCTT TGCCGAACGT GACCAGTTTC AGGAGCGCAT AAAGTGGGTG
TATGAACTGT TTCCACGTCT GCATGAGCGC CGTGTTCAGC GGGCGGGCAC CATGTCCGGC
GGTGAACAGC AGATGCTGGC GATTGGTCGC GCGCTGATGA GCAATCCGCG TTTGCTGCTA
CTTGATGAGC CATCGCTCGG TCTTGCGCCG ATTATCATCC AGCAAATTTT CGACACCATC
GAGCAGCTGC GCGAGCAGGG GATGACTATC TTCCTCGTCG AGCAGAACGC CAACCAGGCG
CTAAAGCTGG CGGATCGCGG CTACGTGCTG GAAAACGGCC ATGTGGTGCT CTCCGATACC
GGCGACGTGC TGCTGGCGAA CGAAGCAGTG AGAAGTGCGT ATTTAGGCGG GTAA
 
Protein sequence
MEKVMLSFDK VSAHYGKIQA LHEVSLHINQ GEIVTLIGAN GAGKTTLLGT LCGDPRATSG 
RIVFDDKDIT DWQTAKIMRE AVAIVPEGRR VFSRMTVEEN LAMGGFFAER DQFQERIKWV
YELFPRLHER RVQRAGTMSG GEQQMLAIGR ALMSNPRLLL LDEPSLGLAP IIIQQIFDTI
EQLREQGMTI FLVEQNANQA LKLADRGYVL ENGHVVLSDT GDVLLANEAV RSAYLGG