Gene EcolC_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0102 
Symbol 
ID6066893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp106891 
End bp107364 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content55% 
IMG OID641599506 
Productputative tRNA/rRNA methyltransferase YibK 
Protein accessionYP_001723115 
Protein GI170018161 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAACA TCGTACTTTA CGAACCAGAA ATTCCGCCAA ATACTGGCAA CATCATCCGT 
CTTTGCGCTA ATACCGGCTT TCGTCTGCAT ATCATCGAAC CGATGGGATT TGCCTGGGAC
GATAAGCGCC TGCGCCGCGC GGGGCTGGAC TATCACGAGT TTACCGCCGT TACGCGTCAT
CATGACTTTC GCGCGTTCCT CGAAGCAGAA AATCCCCAGC GCCTGTTTGC CCTCACCACG
AAAGGTACGC CTGCTCACAG CGCCGTAAGC TATCAGGATG GCGATTATCT GATGTTCGGC
CCGGAAACAC GCGGCCTGCC AGCGAGCATT CTTGATGCCC TGCCCGCTGA ACAAAAAATT
CGCATTCCGA TGGTGCCGGA CAGCCGCAGC ATGAACCTGT CCAATGCGGT GTCAGTTGTG
GTGTATGAAG CCTGGCGGCA GCTGGGATAT CCGGGAGCGT TGTTGAGAGA TTAG
 
Protein sequence
MLNIVLYEPE IPPNTGNIIR LCANTGFRLH IIEPMGFAWD DKRLRRAGLD YHEFTAVTRH 
HDFRAFLEAE NPQRLFALTT KGTPAHSAVS YQDGDYLMFG PETRGLPASI LDALPAEQKI
RIPMVPDSRS MNLSNAVSVV VYEAWRQLGY PGALLRD