| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0823 |
|---|
| Symbol | |
|---|
| ID | 3617821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | + |
|---|
| Start bp | 1153336 |
|---|
| End bp | 1154634 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 637698771 |
|---|
| Product | Outer membrane efflux protein |
|---|
| Protein accession | YP_303452 |
|---|
| Protein GI | 73667436 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0383439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTTG GTAGCATTTT AATGATAATT AAATTTAACA TGCACAAAAT TTACAGTATA
TTGATACTGA TATTTATCAT ATCAATTACA CCAAATAGTA GTTATTGTAC TAATTTAGAT
CAAGCTTTAC ATACAGCATT ATCAAATAAC CCAAATATAA AAGCAAAACT TTATAATTAC
TTAGGTAATA AACAAAAAAT TAAACTGAAT AGTATATCAA AGTTTTTACC TTCAGTTACA
TATTTAGCAG AAACATATCA ACCAAATCTA TCTTTAGGTA ATAACAATAG AACTATGCGT
CTTATAGTAA CACAACAAGT ATTCAACGGA GGCGCTGATG CTGCTGCTCT TCAACAGTCA
AAGTATCTAT CAAATATAGA AGAATTTGAA TTTCTATCAG AACAACAAAA TATTGTACTT
AACACAGTTA AAGCTTACAT GAAAGTTTTA ACAACAGCTG AAGTATATAA ACTAACACAA
CACACTAAAA AAGTATTTAC AGAACATTTA ACAGCCACAC AAAAACGTTT TTCATTAGGA
GAAGTTACTA AAACAGACGT GTCGTTAGCT ACTGCTAGAT TATCATCAGC TACATCAGAA
TCAATCAAAG CATATGGTGA TATGAAAGCT GCAGAAGCCA ACTATATACA CATAGTTGGA
GAAACACCAG TAGATTTACA ACATCCTATT ATACCAGAAA TACCATCATC TGTAGAAGAA
GCCCTAACAA TAGCACAACA AAATAATCTT TCTCTAAAAG CATCTTATAA TGGGTATCAA
GCAGCAAAAC AAGGAGCTTT AATGGCCATT GCAAATTTAT TGCCATCCAT TAGTATATCA
TCAATAAATT CTTATACTTA TACAGATACT CATAATCCTC TTATAGAACC TAAAAAAATA
GATCATTTTT TCGAAATAAA AATGTCATTA CCTATATTTC AACAAGGATT AAACATTGCT
GCAATTTCAC AATCAAAACT TGCAATAAAA CAAAAAATGT ATTCACATTA TGAAGTATTA
AATGCTATTA AGGAGGCAGT AGTTTTAAAT TGGGAAAATA TTTCCACAGC TAATTCTATG
TTGCAAGCAG CACAAGATTC TGTTAAATAC TCAGAAGTGG TATTATCTGG CATTAAACAG
GAAGCAGAGT TAAATTTAAG AACAGTTTTA GATGTACTGG ATGCAGAGCA AGAACTATTA
AAAGCAAAAG TCAATCTGGT TAATGTACAA AGTAATGTTG TAATAAGTAT GTATAATTTA
CTTGCATTAA TAGGACAACT GAACATTAAT TATATTTAA
|
|---|
| Protein sequence | MIVGSILMII KFNMHKIYSI LILIFIISIT PNSSYCTNLD QALHTALSNN PNIKAKLYNY
LGNKQKIKLN SISKFLPSVT YLAETYQPNL SLGNNNRTMR LIVTQQVFNG GADAAALQQS
KYLSNIEEFE FLSEQQNIVL NTVKAYMKVL TTAEVYKLTQ HTKKVFTEHL TATQKRFSLG
EVTKTDVSLA TARLSSATSE SIKAYGDMKA AEANYIHIVG ETPVDLQHPI IPEIPSSVEE
ALTIAQQNNL SLKASYNGYQ AAKQGALMAI ANLLPSISIS SINSYTYTDT HNPLIEPKKI
DHFFEIKMSL PIFQQGLNIA AISQSKLAIK QKMYSHYEVL NAIKEAVVLN WENISTANSM
LQAAQDSVKY SEVVLSGIKQ EAELNLRTVL DVLDAEQELL KAKVNLVNVQ SNVVISMYNL
LALIGQLNIN YI
|
|---|
| |