| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0520 |
|---|
| Symbol | |
|---|
| ID | 3618153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ehrlichia canis str. Jake |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007354 |
|---|
| Strand | - |
|---|
| Start bp | 750009 |
|---|
| End bp | 751079 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 637698465 |
|---|
| Product | secretion protein HlyD |
|---|
| Protein accession | YP_303154 |
|---|
| Protein GI | 73667138 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTACGTA AGCTGTTAAA GTTGAAGTTA CAATATAAGA TAGCGTTTTG TATTCTGCTA
TTGGCTATTT TCTGGATTAG TAGTGGAGTA TTTAAGAAAA GTGTACAGAC AGAACGAGAT
GTATTGCATA ATAATAATAA TGCTCCTAAT ATTCAAGTGA TAGAGTCTCA TGCTCAGGAA
AAGTTAGTAT ATTTATCTTT GATAGGTGAA GTAGAAGCTT TCCATCATGT AAATGTTATA
TCAGAAGTTG CTGGTAAGAT ATCAGATATC TTAGTAAAAG ATGGTGATTA TGTTACAAAA
GGTAATCTTT TAGTTAAGGT AGAAAAATAT GAAAAAGAAG CACAATTAAA GCAAGCTCAA
GCTTTGTTAA GGCAAAGGGA GCTTGAATAT AAAGCTTCAC AATCTTTAAA TGAACATGGT
TATAGGTCTG AAATAAATGA TGCATTGTCT TTTGCTGCTT TGGAATCAGC TAAAGCTGAT
GTAAAAAGAG CACAAATTAA TTTAGGTAGT ACTGAAATAA ATGCTCCTTT TTCTGGATTT
ATAGATAAAA TTAATGTCCA AGTTGGTGAA TTGCTATCTC CTGGAATATC AATTGTGCAC
TTAGTTAATT TTGATAAAAT CAGGGTTGTT ACTTATGTTC CAGAAAAATA TTTAAATAAG
TTGAAGTTAG GGAGTATTTG TAAGATTTTA ATGGCACAAA ATAAGGAAAT AGATGCTCCT
ATTACTTTTA TTAGTAAAGT AATAAATAGT AATACAAGAA CTTATAGAGT TGAGATGGTA
TTGGATAATG ATGATTCAAA GGTTTTTGCA CATGGTGCTG TTTATTCTGT AAAAATTCCA
TTAGGAAATT ATAAAGCTCA CAGGATTTCA TCTTCTGCTT TAGATTTACA AGATAATGGA
GATTTAGGTA TTAAAGTAAT TATTGATGAG AGAGTAAAAT TTATACCTAT TGAGATTATT
GATAGTGAAT ACAATGGAGA TGTTTGGATT GTAAATTCTC CTGATAATAT TAAATTGATT
ACTTTAGGGC ATGAATATGT GAAAGAGAAT ACGCATATTG AGTATGAATA G
|
|---|
| Protein sequence | MLRKLLKLKL QYKIAFCILL LAIFWISSGV FKKSVQTERD VLHNNNNAPN IQVIESHAQE
KLVYLSLIGE VEAFHHVNVI SEVAGKISDI LVKDGDYVTK GNLLVKVEKY EKEAQLKQAQ
ALLRQRELEY KASQSLNEHG YRSEINDALS FAALESAKAD VKRAQINLGS TEINAPFSGF
IDKINVQVGE LLSPGISIVH LVNFDKIRVV TYVPEKYLNK LKLGSICKIL MAQNKEIDAP
ITFISKVINS NTRTYRVEMV LDNDDSKVFA HGAVYSVKIP LGNYKAHRIS SSALDLQDNG
DLGIKVIIDE RVKFIPIEII DSEYNGDVWI VNSPDNIKLI TLGHEYVKEN THIEYE
|
|---|
| |