| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ecaj_0316 |
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| Symbol | |
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| ID | 3617738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ehrlichia canis str. Jake |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007354 |
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| Strand | - |
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| Start bp | 476569 |
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| End bp | 477522 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637698258 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_302958 |
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| Protein GI | 73666942 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.932941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATCA GACAATTCAT ATCAGAACAT CCAGTAATAT TAGCACCAAT GTCTGGTGTA
ACTGATTTTC CATTTCGCTG CCTTGTAAAA AACATTGGAG CTGGATTATT AGTATCAGAA
ATGATAGCAA GTCGTGCAAT GATCATACAA ACAAAACAAA GTCTACAAAA ATCACAAATT
CAAGCTAATA CCGCTGTACA ATTAGCTGGG TGTGATCCAG CAATAATGGC AGAAGCTGCA
AAACTCAATG AAGACATGGG TGCAAAAATT ATAGATATAA ACTTTGGCTG TCCCGTTAAG
AAAGTAGTTA ATAGCTATGC TGGCTCAGCA CTAATGAAAG ATGAAATTAC AGCTGCAAAA
ATCCTAGAAT CTGTAGTAAA AGCAGTAAAA ATTCCAGTAA CATTGAAAAT GCGTACTGGA
TGGGACAATA ACAATCTAAA TTCACCAAAA TTAGCTAAAA TTGCTGAAGA AAGTGGAATA
AAAATGATAA CAATACATGG TAGAACAAGA ACACAAATGT TTAATGGAAA AGCAGACTGG
AAATTCATCA GCAATATCAA GAAATGCGTA AAAATCCCTG TCATAGCTAA TGGAGATATA
AAAAACCTAG ATGATATAAA AACATCATTA GAAGAATCAC AAGCAGATGG AGTCATGATA
GGAAGAGGAG CATACGGTAA ACCATGGTTT ATTAATCAAG CTTTGCATTT TATAAAATCA
GGCATAATTT TACCTGAACC ATCACCATCA GAAAAACTAC AAATTATAAC AAACCATTAT
GACCACATGA TAGAATATTA CGGAAAAGAT ATAGGAGTTA AAATATCAAA AAAACACATA
AGTTGGTATA GTGCTTCTCT AGATAATTCA GCAGAATTTA GATCTCAAGT AAATCGATCA
AATGATAACA GCTTTATCAG AGATAAAATT ATAGATTTTT TTTCACAAAA CTGA
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| Protein sequence | MDIRQFISEH PVILAPMSGV TDFPFRCLVK NIGAGLLVSE MIASRAMIIQ TKQSLQKSQI
QANTAVQLAG CDPAIMAEAA KLNEDMGAKI IDINFGCPVK KVVNSYAGSA LMKDEITAAK
ILESVVKAVK IPVTLKMRTG WDNNNLNSPK LAKIAEESGI KMITIHGRTR TQMFNGKADW
KFISNIKKCV KIPVIANGDI KNLDDIKTSL EESQADGVMI GRGAYGKPWF INQALHFIKS
GIILPEPSPS EKLQIITNHY DHMIEYYGKD IGVKISKKHI SWYSASLDNS AEFRSQVNRS
NDNSFIRDKI IDFFSQN
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