Gene Ecaj_0194 details

Gene Information

• Locus tag: Ecaj_0194
• Symbol: rpsD
• ID: 3617632
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ehrlichia canis str. Jake
• Kingdom: Bacteria
• Replicon accession: NC_007354
• Strand: +
• Start bp: 291984
• End bp: 292592
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637698137
• Product: 30S ribosomal protein S4
• Protein accession: YP_302843
• Protein GI: 73666827
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGTAC AAAGAAAATA TAGAGCAAGT CGTAGATTAG GTGTAAGCCT TTGGGGGAGA 
TCTAAAGATC CGTTTAATAC AAGGAATTAT CCACCTGGTC AGCATGGTAA TATGGGTTAT 
AAGAAGCCAT CTGATTTCGG TAAGCAGTTT GCAGCGCATA AGAAGTTTAA GTTTTATTAT 
GCTATAAGTA GTAAACAGAT GCGCAATGTT TTCTTGAAAG CATATAAGAA AAGAGGCGAT 
ACTGGAGATA ATTTTGTTGG GCTATTGGAA TCTAGGTTAT CAAGTATTCT ATATAATTCT 
GGGCTTGTAC CGACTATTTT TTCTGCAAGG CAACTAATAT CTCATAAGCA TGTTTTAGTT 
AACGGTAAGA CAGTAAACAT ATCGAGTTAT ATTGTAAAGG TAGGTGATGT AGTTACCCTT 
AAAGAAAAGG CAAAGAATTT ACCTGCAGTG ATTGCTGCGA TACAATCTCA AGAGCATAAG 
GTACCTGACT ATTTGGAAGT TGATACTCAA GAGAAGTCGG TGAGGTATTT AAGAGTGCCT 
AAGTATTGTG AAGTTCCATA TCCAGCTACT ATGGAAGTTA ATTTAGTTAT AGAATTTTAC 
TCTAGATAA 

 

Protein sequence

MAVQRKYRAS RRLGVSLWGR SKDPFNTRNY PPGQHGNMGY KKPSDFGKQF AAHKKFKFYY 
AISSKQMRNV FLKAYKKRGD TGDNFVGLLE SRLSSILYNS GLVPTIFSAR QLISHKHVLV 
NGKTVNISSY IVKVGDVVTL KEKAKNLPAV IAAIQSQEHK VPDYLEVDTQ EKSVRYLRVP 
KYCEVPYPAT MEVNLVIEFY SR