Gene EcSMS35_A0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0117 
SymbolcmlA 
ID6106497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp87706 
End bp88347 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content43% 
IMG OID641614859 
Productchloramphenicol acetyltransferase 2 
Protein accessionYP_001740000 
Protein GI170650787 
COG category[V] Defense mechanisms 
COG ID[COG4845] Chloramphenicol O-acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.12241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTA CCCGGATTGA CCTGAATACC TGGAATCGCA GGGAACATTT TGCCCTTTAT 
CGTCAGCAGA TTAAATGCGG ATTCAGCCTG ACCACCAAAC TCGATATTAC CGCTTTGCGT
ACTGCACTGG CGAAAACCGG TTATAAGTTT TATCCGCTGA TGATTTACCT GATCTCCCGG
GCTGTTAATC AGTTTCCGGA GTTCCGGATG GCAATGAAAG ATAATGAACT GATTTACTGG
GAACAGTCAG ACCCGGTCTT TACTGTCTTT CATAAAGAAA CCGAAACATT CTCCGCACTG
TCCTGCCGTT ATTTTCCGGA TCTCAGTGAG TTTATGGCGG GTTATAACGC GGTAACAGCA
GAATATCAGC ATGATACCAG GTTGTTTCCG CAGGGAAATT TACCGGAGAA TCACCTGAAT
ATATCATCGT TACCCTGGGT GAGTTTTGAC GGATTTAATC TGAATATCAC CGGAAATGAT
GATTATTTTT CCCCGGTTTT TACAATGGCA AAGTTTCAGC AGGAAGGTGA CCGCGTACTA
TTACCTGTTT CTGTACAGGT TCATCATGCA GTCTGTGATG GTTTTCATGC AGCAAGGTTT
ATCAATACAC TTCAGCTGAT GTGTGATAAC ATACTGAAAT AA
 
Protein sequence
MNFTRIDLNT WNRREHFALY RQQIKCGFSL TTKLDITALR TALAKTGYKF YPLMIYLISR 
AVNQFPEFRM AMKDNELIYW EQSDPVFTVF HKETETFSAL SCRYFPDLSE FMAGYNAVTA
EYQHDTRLFP QGNLPENHLN ISSLPWVSFD GFNLNITGND DYFSPVFTMA KFQQEGDRVL
LPVSVQVHHA VCDGFHAARF INTLQLMCDN ILK