5 homologs were found in PanDaTox collection
for query gene EcSMS35_A0111 on replicon NC_010488
Organism: Escherichia coli SMS-3-5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010488  EcSMS35_A0111  colicin-M  100 
 
 
271 aa  561  1.0000000000000001e-159  Escherichia coli SMS-3-5  Bacteria  normal  0.78894  hitchhiker  0.00593759 
 
 
-
 
NC_012917  PC1_2303  ferredoxin (2Fe-2S)  46.53 
 
 
268 aa  136  3.0000000000000003e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0830078  n/a   
 
 
-
 
NC_004578  PSPTO_0572  bacteriocin, putative  37.58 
 
 
276 aa  101  1e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.453961  n/a   
 
 
-
 
NC_010551  BamMC406_0333  hypothetical protein  29.56 
 
 
377 aa  69.7  0.00000000005  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.597405 
 
 
-
 
NC_008390  Bamb_0324  hypothetical protein  28.57 
 
 
372 aa  62.8  0.000000007  Burkholderia ambifaria AMMD  Bacteria  normal  0.370693  n/a   
 
 
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