Gene EcSMS35_A0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_A0111 
Symbolcma 
ID6106457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010488 
Strand
Start bp82865 
End bp83680 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content41% 
IMG OID641614853 
Productcolicin-M 
Protein accessionYP_001739994 
Protein GI170650908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.78894 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00593759 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAACCT TAACTGTTCA TGCACCATCA CCATCAACTA ACTTACCAAG TTATGGCAAT 
GGTGCATTTT CTCTTTCAGC ACCGCATGTT CCTGGTGCTG GACCTCTTTT AGTCCAGGTT
GTTTATAGTT TTTTCCAGAG TCCAAACATG TGTCTTCAGG CTTTAACTCA ACTTGAGGAT
TACATCAAAA AACATGGGGC TAGCAACCCT CTCACATTGC AGATCATATC GACAAATATT
GGTTACTTCT GTAACGCCGA CCGAAATCTG GTTCTTCACC CTAGAATAAG CGTTTATGAC
GCTTACCACT TCTCAAAACC AGCGCCAAGT CAATATGACT ATCGCTCAAT GAATATGAAA
CAAATGAGCG GTAATGTCAC TACACCAATT GTGGCGCTTG CTCACTATTT ATGGGGTAAT
GGCGCTGAAA GGAGCGTTAA TATCGCCAAC ATTGGTCTTA AAATTTCCCC TATGAAAATT
AATCAGATAA AAGACATTAT AAAATCTGGT GTAGTAGGTA CATTCCCTGT TTCTACAAAG
TTCACACATG CCACTGGTGA TTATAATGTT ATTACCGGTG CATATCTTGG TAATATCACA
CTGAAAACAG AAGGTACTTT AACTATCTCT GCCAATGGCT CCTGGACTTA CAATGGCGTT
GTTCGTTCAT ATGATGATAA ATACGATTTT AACGCCAGCA CTCACCGTGG CGTCATCGGA
GAGTCGCTCA CAAGGCTCGG GGCGATGTTT TCTGGTAAAG AGTACCAGAT ACTGCTTCCT
GGTGAAATTC ACATTAAAGA AAGTGGTAAG CGATAA
 
Protein sequence
METLTVHAPS PSTNLPSYGN GAFSLSAPHV PGAGPLLVQV VYSFFQSPNM CLQALTQLED 
YIKKHGASNP LTLQIISTNI GYFCNADRNL VLHPRISVYD AYHFSKPAPS QYDYRSMNMK
QMSGNVTTPI VALAHYLWGN GAERSVNIAN IGLKISPMKI NQIKDIIKSG VVGTFPVSTK
FTHATGDYNV ITGAYLGNIT LKTEGTLTIS ANGSWTYNGV VRSYDDKYDF NASTHRGVIG
ESLTRLGAMF SGKEYQILLP GEIHIKESGK R