| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_A0039 |
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| Symbol | traA |
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| ID | 6106451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010488 |
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| Strand | - |
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| Start bp | 34907 |
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| End bp | 35266 |
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| Gene Length | 360 bp |
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| Protein Length | 119 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641614786 |
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| Product | conjugal transfer pilin subunit TraA |
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| Protein accession | YP_001739927 |
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| Protein GI | 170650824 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02758] type IV conjugative transfer system pilin TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 0.966345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGCCG TTTTAAGTGT TCAGGGTGCT TCTGCGCCCG TCAAAAAGAA GTCGTTTTTT
TCTAAATTCA CTCGTCTGAA TATGCTTCGC CTGGCTCGCG CTGTGATCCC GGCTGCTGTT
CTGATGATGT TCTTCCCGCA ACTGGCAATG GCAGCACAGG GCCAGGACCT GATGGCAAGC
GGTAACACCA CGGTTAAGGC GACCTTCGGT AAGGACTCCA GTGTTGTTAA ATGGGTTGTT
CTGGCTGAAG TTCTGGTCGG TGCTGTCATG TACATGATGA CCAAAAACGT CAAGTTCCTG
GCCGGTTTTG CCATCATCTC TGTATTTATT GCTGTGGGTA TGGCCGTCGT TGGCCTCTGA
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| Protein sequence | MDAVLSVQGA SAPVKKKSFF SKFTRLNMLR LARAVIPAAV LMMFFPQLAM AAQGQDLMAS
GNTTVKATFG KDSSVVKWVV LAEVLVGAVM YMMTKNVKFL AGFAIISVFI AVGMAVVGL
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