Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4925 |
Symbol | |
ID | 6145001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 5040777 |
End bp | 5041850 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641619728 |
Product | patatin family phospholipase |
Protein accession | YP_001746832 |
Protein GI | 170684165 |
COG category | [R] General function prediction only |
COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCAGC GAATACCTGT AACGCTTGGT AATATTGCGC CGTTGTCGCT AAGGCCGTTC CAGCCTGGAC GGATTGCTCT GGTGTGCGAA GGCGGCGGAC AGCGTGGAAT TTTCACGGCT GGCGTGCTGG ATGAGTTTAT GCGCGCGCAG TTTAATCCTT TCGATCTTTA TCTCGGCACA TCTGCCGGGG CGCAGAACCT CTCGGCGTAT ATCTGTAATC AGCCCGGTTA CGCGCGCAAA GTCATCATGC GCTATACCAC AAAACGCGAA TTTTTCGATC CATTGCGCTT TGTCCGTGGA GGAAATCTTA TCGATCTCGA CTGGCTGGTG GAGGCCACCG CAAGCCAGAT GCCGTTGCAA ATGGATACCG CCGCGCGGTT GTTTGACAGC GGCAAATCGT TTTATATGTG CGCCTGTCGT CAGGATGACT ACGCGCCGAA TTACTTTTTA CCAACCAAAC AAAACTGGCT GGATGTGATT CGCGCCTCCA GTGCGATACC TGGCTTTTAT CGTAGCGGAG TGTCGCTGGA AGGCATTAAC TACCTGGATG GCGGGATCAG TGATGCGATC CCGGTTAAAG AGGCGGCAAG GCAGGGAGCA AAAACGTTGG TCGTCATCCG CACTGTGCCG TCACAAATGT ACTACACGCC GCAGTGGTTC AAACGCATGG AACGCTGGCT GGGTGACAGT AGCCTGCAGC CGCTGGTCAA TCTGGTGCAG CATCATGAAA CCAGCTATCG TGAGATTCAG CAATTTATTG AGAAACCACC GGGCCAGCTG CGGATATTCG AAATTTATCC GCCGAAGCCA TTGCATAGTA TTGCGCTCGG CAGTCGGATT CCGGCGCTGC GTGAAGACTA TAAACTTGGG CGTTTATGTG GGCGTTATTT TCTGGCAACG GTCGGTAAAT TATTGACTGA AAAAGCGCCG CTGAGCCGCC ATCTGGTGCC GGTGGTGACG CCGGAGTCGA TCGTTATTCC GCCTGCGCCA GTCGCCAACG ATACGTTGGT TGCCGAAGTG AGCGACGCTC CGCAGGCGAA CGACCCGACA TTTAACAATG AGGATCTGGC TTGA
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Protein sequence | MGQRIPVTLG NIAPLSLRPF QPGRIALVCE GGGQRGIFTA GVLDEFMRAQ FNPFDLYLGT SAGAQNLSAY ICNQPGYARK VIMRYTTKRE FFDPLRFVRG GNLIDLDWLV EATASQMPLQ MDTAARLFDS GKSFYMCACR QDDYAPNYFL PTKQNWLDVI RASSAIPGFY RSGVSLEGIN YLDGGISDAI PVKEAARQGA KTLVVIRTVP SQMYYTPQWF KRMERWLGDS SLQPLVNLVQ HHETSYREIQ QFIEKPPGQL RIFEIYPPKP LHSIALGSRI PALREDYKLG RLCGRYFLAT VGKLLTEKAP LSRHLVPVVT PESIVIPPAP VANDTLVAEV SDAPQANDPT FNNEDLA
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