| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4922 |
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| Symbol | prfC |
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| ID | 6147399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 5037780 |
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| End bp | 5039369 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641619725 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_001746829 |
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| Protein GI | 170683721 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.55632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTGT CTCCTTATTT GCAAGAGGTG GCGAAGCGCC GCACTTTTGC CATTATTTCT
CACCCGGACG CCGGTAAAAC TACCATCACC GAGAAGGTGC TGCTGTTCGG ACAGGCCATT
CAGACCGCCG GTACAGTAAA AGGCCGTGGT TCCAACCAGC ACGCTAAGTC GGACTGGATG
GAGATGGAAA AGCAGCGTGG GATCTCCATT ACTACTTCTG TGATGCAGTT TCCGTATCAC
GATTGCCTGG TTAACCTGCT CGACACCCCG GGGCACGAAG ACTTCTCGGA AGATACCTAT
CGTACCCTGA CGGCGGTGGA CTGCTGCCTG ATGGTTATCG ACGCTGCAAA AGGTGTTGAA
GATCGTACCC GTAAGCTGAT GGAAGTTACC CGTCTGCGCG ATACGCCGAT CCTCACCTTT
ATGAACAAAC TTGACCGTGA TATCCGCGAC CCGATGGAAC TGCTCGATGA AGTTGAGAAC
GAGCTGAAAA TCGGCTGCGC ACCGATCACC TGGCCGATTG GCTGCGGCAA GCTGTTTAAA
GGCGTTTACC ACCTTTATAA AGATGAAACC TATCTCTATC AGAGCGGTAA AGGCCACACC
ATTCAGGAAG TCCGCATTGT TAAAGGGCTG AATAACCCGG ATCTCGACGC TGCGGTTGGT
GAAGATCTGG CACAGCAACT GCGTGACGAA CTGGAACTGG TGAAAGGCGC GTCTAACGAG
TTCGACAAAG AATTGTTCCT TGCGGGCGAA ATTACTCCAG TGTTCTTTGG TACTGCGCTG
GGTAACTTCG GCGTTGATCA TATGCTGGAT GGCCTGGTGG AGTGGGCCCC AGCGCCGATG
CCGCGTCAGA CTGATACCCG TACCGTAGAG GCGAGCGAAG ATAAATTTAC CGGCTTCGTA
TTTAAAATTC AGGCCAACAT GGACCCGAAA CACCGCGACC GCGTGGCGTT TATGCGTGTG
GTGTCCGGTA AATATGAAAA AGGCATGAAG CTGCGCCAGG TGCGTACTGC GAAAGATGTG
GTGATCTCCG ACGCGCTGAC CTTTATGGCG GGTGACCGTT CGCACGTTGA AGAAGCGTAT
CCTGGCGATA TCCTTGGTCT GCACAACCAC GGCACCATTC AGATCGGCGA CACCTTTACC
CAGGGTGAGA TGATGAAGTT CACCGGTATT CCGAACTTCG CGCCAGAACT GTTCCGTCGT
ATCCGCCTGA AAGATCCGCT GAAGCAAAAA CAGCTGCTCA AAGGGCTGGT ACAGCTTTCC
GAAGAGGGCG CGGTGCAGGT GTTCCGTCCG ATCTCCAACA ACGACCTGAT CGTTGGTGCA
GTTGGTGTGC TGCAGTTTGA TGTGGTGGTA GCGCGCCTGA AGAGCGAATA CAACGTTGAA
GCAGTGTATG AGTCAGTCAA CGTTGCCACT GCCCGCTGGG TAGAATGTGC GGACGCGAAG
AAATTCGAAG AGTTCAAGCG TAAGAACGAA AGCCAACTGG CGCTTGATGG CGGCGATAAC
CTCGCTTACA TCGCTACCAG CATGGTCAAC CTGCGCCTGG CGCAGGAACG TTATCCGGAC
GTTCAGTTCC ACCAGACCCG CGAGCATTAA
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| Protein sequence | MTLSPYLQEV AKRRTFAIIS HPDAGKTTIT EKVLLFGQAI QTAGTVKGRG SNQHAKSDWM
EMEKQRGISI TTSVMQFPYH DCLVNLLDTP GHEDFSEDTY RTLTAVDCCL MVIDAAKGVE
DRTRKLMEVT RLRDTPILTF MNKLDRDIRD PMELLDEVEN ELKIGCAPIT WPIGCGKLFK
GVYHLYKDET YLYQSGKGHT IQEVRIVKGL NNPDLDAAVG EDLAQQLRDE LELVKGASNE
FDKELFLAGE ITPVFFGTAL GNFGVDHMLD GLVEWAPAPM PRQTDTRTVE ASEDKFTGFV
FKIQANMDPK HRDRVAFMRV VSGKYEKGMK LRQVRTAKDV VISDALTFMA GDRSHVEEAY
PGDILGLHNH GTIQIGDTFT QGEMMKFTGI PNFAPELFRR IRLKDPLKQK QLLKGLVQLS
EEGAVQVFRP ISNNDLIVGA VGVLQFDVVV ARLKSEYNVE AVYESVNVAT ARWVECADAK
KFEEFKRKNE SQLALDGGDN LAYIATSMVN LRLAQERYPD VQFHQTREH
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