| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4904 |
|---|
| Symbol | mdoB |
|---|
| ID | 6147481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 5025483 |
|---|
| End bp | 5027774 |
|---|
| Gene Length | 2292 bp |
|---|
| Protein Length | 763 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641619707 |
|---|
| Product | phosphoglycerol transferase I |
|---|
| Protein accession | YP_001746814 |
|---|
| Protein GI | 170682467 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0182447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAGAAC TACTCTCTTT CGCCCTTTTT CTCGCCTCTG TGCTGATTTA CGCATGGAAA
GCGGGACGTA ACACCTGGTG GTTTGCAGCC ACGTTAACGG TGCTGGGGCT ATTTGTCGTT
TTAAATATCA CCCTGTTTGC CAGCGACTAT TTTACTGGCG ATGGTATTAA CGACGCGGTT
CTCTATACCT TAACCAACAG CCTGACCGGT GCTGGCGTCA GCAAATACAT TCTGCCGGGT
ATCGGCATTG TGCTGGGGCT GACAGCGGTG TTCGGTGCGC TGGGCTGGAT CCTGCGCCGT
CGTCGTCATC ATCCGCACCA TTTTGGTTAC AGCCTGCTGG CACTCTTACT GGCGCTGGGT
TCAGTGGATG CCAGCCCGGC ATTTCGTCAG ATAACGGAAC TGGTGAAATC CCAGTCACGC
GACGGCGACC CGGACTTTGC GGCTTATTAT AAAGAGCCGT CGAAAACTAT CCCTGACCCG
AAACTCAACC TGGTTTATAT CTACGGCGAA AGTCTCGAGC GAACCTATTT TGATAACGAA
GCTTTCCCGG ATCTCACGCC TGAACTGGGC GCGTTGAAAA ATGAAGGCCT GGATTTCAGC
CACACGCAGC AGCTGCCAGG AACGGATTAC ACGATTGCGG GCATGGTGGC TTCTCAGTGC
GGCATACCGC TGTTTGCCCC CTTTGAAGGC AACGCCTCCG CCTCTGTCTC CAGCTTCTTC
CCGCAGAACA TCTGTCTGGG CGATATCCTG AAAAACTCGG GTTATCAGAA CTATTTCGTG
CAGGGCGCGA ATCTGCGTTT TGCCGGTAAA GATGTGTTCC TGAAATCGCA CGGCTTCGAC
CACTTATTCG GCTCAGAAGA GCTGAAAAGC GTGGTGGCCG ACCCGCACTA TCGCAACGAC
TGGGGATTCT ACGACGATAC CGTTCTCGAT GAAGCGTGGA AAAAGTTTGA AGAGCTTTCC
CGCTCAGGTC AGCGATTCTC ACTGTTTACC CTGACAGTCG ATACCCATCA CCCGGATGGT
TTTATCTCGC GTACCTGTAA CCGCAAAAAA TATGATTTTG ACGGTAAGCC GAATCAGTCA
TTCAGCGCGG TAAGTTGCAG TCAGGAGAAT ATCGCGACGT TTATCAACAA AATCAAAGCG
TCACCGTGGT TTAAAGATAC TGTTATCGTC GTCTCTTCTG ACCATTTAGC GATGAACAAC
ACGGCGTGGA AATACCTTAA TAAACAGGAT CGCAATAACC TGTTTTTTGT CATCCGTGGC
GACAAGCCGC AGCAAGAGAC GCTGGCGGTA AAGCGTAACA CGATGGATAA CGGCGCGACG
GTGCTGGACA TTCTCGGTGG CGATAACTAT CTCGGACTTG GTCGTAGCAG TTTATCCGGG
CAGTCGATGT CGGAAATCTT CCTCAATATC AAAGAGAAAA CATTGGCGTG GAAGCCGGAT
ATCATCCGCC TGTGGAAATT CCCTAAAGAG ATGAAAGAGT TCACCATCGA CCAGCAGAAA
AACATGATTG CCTTCTCGGG TAGCCATTTC CGTTTGCCGC TGCTGTTGCG GGTTTCAGAC
AAACGCGTGG AACCGCTGCC GGAAAGTGAA TACTCAGCAC CGCTGCGTTT CCAGCTGGCC
GATTTCGCTC CACGCGACAA TTTCGTCTGG GTTGACCGTT GCTACAAGAT GGCACAACTT
TGGGCTCCGG AACTGGCACT CTCCACCAAC TGGTGTGTCT CGCAAGGGCA GCTTGGCGGT
CAGCAAATTG TCCAGCATGT TGACAAAACA ACATGGAAGG GCAAAACGGC ATTTAAAGAT
ACGGTCATCG ACATGGCGCG TTACAAAGGC AATGTCGATA CGCTGAAGAT TGTTGATAAC
GATATTCGCT ACAAAGCCGA CAGTTTCATC TTTAACGTCG CCGGTGCGCC GGAAGAGGTG
AAACAGTTTA GCGGGATTTC TCGTCCGGAG TCGTGGGGCC GCTGGTCCAA CGCTCAGCTG
GGCGATGAAG TAAAAATCGA GTATAAGCAT CCGCTGCCGA AGAAATTTGA CCTGGTGATT
ACCGCCAAAG CATACGGCAA TAACGCCAGC CGTCCTATTC CGGTACGCGT AGGCAATGAA
GAACAAACCC TTGTACTGGG CAATGAAGTG ACCACCACCA CGCTGCATTT CGATAACCCA
ACCGATGCCG ACACGCTGGT AATTGTGCCG CCGGAACCTG TCTCAACCAA CGAAGGGAAT
ATCCTCGGAC ACTCGCCGCG TAAGCTCGGG ATCGGCATGG TGGAGATTAA AGTGGTAGAA
CGTGAAGGGT AA
|
|---|
| Protein sequence | MSELLSFALF LASVLIYAWK AGRNTWWFAA TLTVLGLFVV LNITLFASDY FTGDGINDAV
LYTLTNSLTG AGVSKYILPG IGIVLGLTAV FGALGWILRR RRHHPHHFGY SLLALLLALG
SVDASPAFRQ ITELVKSQSR DGDPDFAAYY KEPSKTIPDP KLNLVYIYGE SLERTYFDNE
AFPDLTPELG ALKNEGLDFS HTQQLPGTDY TIAGMVASQC GIPLFAPFEG NASASVSSFF
PQNICLGDIL KNSGYQNYFV QGANLRFAGK DVFLKSHGFD HLFGSEELKS VVADPHYRND
WGFYDDTVLD EAWKKFEELS RSGQRFSLFT LTVDTHHPDG FISRTCNRKK YDFDGKPNQS
FSAVSCSQEN IATFINKIKA SPWFKDTVIV VSSDHLAMNN TAWKYLNKQD RNNLFFVIRG
DKPQQETLAV KRNTMDNGAT VLDILGGDNY LGLGRSSLSG QSMSEIFLNI KEKTLAWKPD
IIRLWKFPKE MKEFTIDQQK NMIAFSGSHF RLPLLLRVSD KRVEPLPESE YSAPLRFQLA
DFAPRDNFVW VDRCYKMAQL WAPELALSTN WCVSQGQLGG QQIVQHVDKT TWKGKTAFKD
TVIDMARYKG NVDTLKIVDN DIRYKADSFI FNVAGAPEEV KQFSGISRPE SWGRWSNAQL
GDEVKIEYKH PLPKKFDLVI TAKAYGNNAS RPIPVRVGNE EQTLVLGNEV TTTTLHFDNP
TDADTLVIVP PEPVSTNEGN ILGHSPRKLG IGMVEIKVVE REG
|
|---|
| |