Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4897 |
Symbol | |
ID | 6142875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 5016965 |
End bp | 5017354 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641619700 |
Product | putative endoribonuclease L-PSP |
Protein accession | YP_001746807 |
Protein GI | 170679647 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCATTA AACGTTACGG TACGGAAGGT GGAACAGGCA CTGGCGGGCA GCATTTGCCT TTTGCCAGGG CGGTTGAGGC GGGCGGCTGG CTGTACGTCT CCGGGCAAAC ACCCATGAAA AACGGTGAAG TGGTAGAAGG CGGAATCGTT GAACAGTCAC GACTGGCGAT TCAAAACTGT GTCGACATCA TGACTGAAGC CGGTTATAGC CTGGTGGATG TGGTTCACGT GAAAGTGATC CTGACCGACG CCCGCTATTT CCAGTCATTT AATAAAGTAT TCAGAGAATT TTTTGGCGAG AATCCACCTG CACGTATTTG TTGTGTGGCT GATCTGGTTG TCGATTGTAA AGTCGAAGTC GATGTGACCT GTTATAACGC GACCCGCTAA
|
Protein sequence | MSIKRYGTEG GTGTGGQHLP FARAVEAGGW LYVSGQTPMK NGEVVEGGIV EQSRLAIQNC VDIMTEAGYS LVDVVHVKVI LTDARYFQSF NKVFREFFGE NPPARICCVA DLVVDCKVEV DVTCYNATR
|
| |