Gene EcSMS35_4897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4897 
Symbol 
ID6142875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp5016965 
End bp5017354 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content50% 
IMG OID641619700 
Productputative endoribonuclease L-PSP 
Protein accessionYP_001746807 
Protein GI170679647 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA AACGTTACGG TACGGAAGGT GGAACAGGCA CTGGCGGGCA GCATTTGCCT 
TTTGCCAGGG CGGTTGAGGC GGGCGGCTGG CTGTACGTCT CCGGGCAAAC ACCCATGAAA
AACGGTGAAG TGGTAGAAGG CGGAATCGTT GAACAGTCAC GACTGGCGAT TCAAAACTGT
GTCGACATCA TGACTGAAGC CGGTTATAGC CTGGTGGATG TGGTTCACGT GAAAGTGATC
CTGACCGACG CCCGCTATTT CCAGTCATTT AATAAAGTAT TCAGAGAATT TTTTGGCGAG
AATCCACCTG CACGTATTTG TTGTGTGGCT GATCTGGTTG TCGATTGTAA AGTCGAAGTC
GATGTGACCT GTTATAACGC GACCCGCTAA
 
Protein sequence
MSIKRYGTEG GTGTGGQHLP FARAVEAGGW LYVSGQTPMK NGEVVEGGIV EQSRLAIQNC 
VDIMTEAGYS LVDVVHVKVI LTDARYFQSF NKVFREFFGE NPPARICCVA DLVVDCKVEV
DVTCYNATR