| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4873 |
|---|
| Symbol | |
|---|
| ID | 6147389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4985037 |
|---|
| End bp | 4985720 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641619677 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_001746784 |
|---|
| Protein GI | 170682282 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3314] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAC AAGGGGATGC TGTAGCCGGG GAGCTGGCGA CAGAAAAAGT GGGTATTAAA
GGGTATCTGG CTTTTTTTCT CACCATAATC TTTTTTTCCG GTGTTTTTTC CGGAACAGAC
AGCTGGTGGC GCGTTTTTGA TTTTTCCGTT CTGAACGGAT CGTTTGGGCA ACTGCCTGGT
GCGAACGGAG CCACCACCTC GTTTCGCGGG GCGGGTGGCG CGGGGGCTAA AGATGGCTTT
CTCTTTGCGC TGGAGCTGGC ACCGTCAGTC ATTCTCTCTC TGGGAATTAT CTCGATTACC
GATGGTCTTG GCGGATTGCG CGCCGCGCAG CAGTTAATGA CGCCCGTGCT AAAACCGTTG
TTGGGCATTC CAGGGATCTG CTCGCTGGCG CTGATCGCTA ACCTGCAAAA CACCGATGCC
GCCGCCGGTA TGACCAAAGA GCTGGCGCAG GAAGGTGAAA TTACCGAACG TGATAAAGTG
ATATTCGCCG CATATCAAAC CAGCGGTAGC GCCATTATCA CCAACTACTT CTCTTCCGGC
GTCGCGGTGT TTGCCTTTCT GGGCACGTCC GTAATCGTAC CTTTAGCCGT CATCCTGGTG
TTTAAATTTG TCGGAGCCAA CATTTTGCGC GTCTGGCTTA ACTTCGAAGA ACGTCGCAAC
CCAACGCAAG GAGCGCAAGC ATGA
|
|---|
| Protein sequence | MTQQGDAVAG ELATEKVGIK GYLAFFLTII FFSGVFSGTD SWWRVFDFSV LNGSFGQLPG
ANGATTSFRG AGGAGAKDGF LFALELAPSV ILSLGIISIT DGLGGLRAAQ QLMTPVLKPL
LGIPGICSLA LIANLQNTDA AAGMTKELAQ EGEITERDKV IFAAYQTSGS AIITNYFSSG
VAVFAFLGTS VIVPLAVILV FKFVGANILR VWLNFEERRN PTQGAQA
|
|---|
| |