| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4838 |
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| Symbol | fimB |
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| ID | 6145082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4945581 |
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| End bp | 4946183 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641619642 |
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| Product | tyrosine recombinase |
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| Protein accession | YP_001746749 |
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| Protein GI | 170681303 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAATA AGGCTGATAA CAAAAAAAGG AACTTCCTTA CCCATAGTGA AATCGAATCA
CTCCTTAAAG CAGCAAATAC CGGGCCTCAT GCTGCACGTA ATTATTGTCT GACTTTGCTT
TGTTTTATTC ATGGTTTCCG GGCGAGTGAA ATTTGCCGAT TGAGGATTTC GGATATTGAT
CTTAAGGCAA AGTGTATATA TATCCATCGA TTAAAAAAAG GCTTTTCAAC AACGCACCCG
CTATTGAACA AAGAAATTCA GGCTTTAAAA AACTGGTTGA GTATCCGTAC TTCTTATCCG
CATGCTGAGA GCGAGTGGGT ATTTTTATCA CGTAAGGGGA ATCCACTTTC TCGGCAACAG
TTTTACCATA TTATCTCGAC TTCCGGTGGT AATGCCGGGT TGTCACTGGA GATTCATCCG
CACATGTTAC GCCATTCGTG TGGTTTTGCT TTGGCGAATA TGGGAATAGA TACGCGACTT
ATCCAGGATT ATCTTGGGCA TCGCAATATT CGTCATACTG TCTGGTATAC CGCCAGCAAT
GCAGGGCGTT TTTACGGCAT CTGGGATAGA GCCAGAGGAC GACAGCGTCA CGCTGTTTTA
TAG
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| Protein sequence | MKNKADNKKR NFLTHSEIES LLKAANTGPH AARNYCLTLL CFIHGFRASE ICRLRISDID
LKAKCIYIHR LKKGFSTTHP LLNKEIQALK NWLSIRTSYP HAESEWVFLS RKGNPLSRQQ
FYHIISTSGG NAGLSLEIHP HMLRHSCGFA LANMGIDTRL IQDYLGHRNI RHTVWYTASN
AGRFYGIWDR ARGRQRHAVL
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