| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4830 |
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| Symbol | |
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| ID | 6143801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4930649 |
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| End bp | 4936990 |
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| Gene Length | 6342 bp |
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| Protein Length | 2113 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641619634 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001746741 |
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| Protein GI | 170680718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCGT CCGTTGTCAG TCGGCAGGTC GCCGACAGCG TTGCCGCCTT TTTACGGGCG
GCGTTCCCGC TAAACAGCCC GCTGTTTAAC GGTGAGAATA ACGATAATGT CTCAATGCTG
GAGCAATTTC TGGCCCAGCC CGAAACGCTG CTGAAAGGAC CATACCTTTC CGCCCAGTTG
CCGTTTCGTA AAAGTGACTT ACCGCTGAAT TTTTTCCCTA ATCTGACGCT GCCGTTCCCG
CCGCACGCGC ATCAGGCCCG GGCATTTCAG CGTCTGGGAA GCGACGCGCC ACAGCCGACG
CTGGTCGCAA CCGGTACCGG CTCCGGTAAA ACAGAATGTT TTATGTTCCC GCTGCTCAAC
CACTGCGCGG GCGCGTCACA AGCCGGGGTT AAAGCAATTA TCATCTACCC GATGAACGCC
CTGGCAACCG ATCAGGCCAG CCGTTTCGCC AAAACCATCG CCAGCGATCC ACAACTGCAT
GGCAAGGTGA CCGTCGGCTT GTTTGTCGGC GACAGCGAAA TCGAACCCAG CAAGAAAATG
TCGGCAGAAA AGGTCATTAC CTGTAAGCAC ACGCTGCGCG AAAGCCCGCC GGACATCCTG
TTGACCAACT ACAAAATGCT CGACTACCTG CTGATGCGCC CTGGCGATCA GCCGCTCTGG
CGTTACAACC AGCCCGGCTC ATTGCGTTAC CTGGTCGTGG ATGAATTGCA TACGTTTGAT
GGCGCGCAAG GGTCGGATCT GGCCTGTCTG GTGCGACGTC TGAAGCATCA CATAGGTGTG
GATAACCAAC GATTCGCCTG CGTCGGGACA TCAGCTACCG TCGGCGACGA ACTGGGGCAA
CTGCTCGATT ACGCAAAAAC AATCTTTGAC CAGCCGTTTA CCGATGACGC CGTTATTCGC
GAAGATCGCT ACACGGCAGC GGAGTACTTG CAGGATTATG CCATTGCGTA CAGTCAGTAT
CCGGGGCCGG AGGTCGCTTC GGCCCTGGAC CCGCAGAGTT ACGCTACCCC GGTAGCGTAT
CTTAACGGGC AAATCCCTTT GTGGTTCCCC GACAGCGACT TGCAACTCCC GGACGATCTG
GAGAGCGACG ACGGGCGTGA AAAGCGTATT GCGCTGGGGT CACTGTTACG CCGCCACAGC
GTGATGCATG TCTTACTCCA TGATCTGCAA GGCGGGATCC TCTCTGAACG AGAGTGTCTG
GAAAATCTCC AGGTTATGCT GGCAGAAAGC GCCGACCATG CCCGACGCGT GCTGCAAAGC
ATTCTGGCAC TGATCGCGCA GGCACGTCTC GAAGTACCGG AAACGGAACA CGATCGGCAA
AAACGTCTCC AGGCGAAGAA AGTGCGTCCG GTGCTGCCAT TTGTGCAACT GCGCTCCCAG
TTGTGGCTTC GTGAGATGCG TCGTCTGGTC GCCAGCGTGG CGAAAACGCC GCGACTGGTG
TTTGCCGATG ATGTGGCGGT GGAAGACCGC GAACACTATT TGCCGGTTAT CCACTGCCGT
GACTGCCACG CAACCGGCTG GGCCAGCCTG CGTCATGGGC AAAGCGTTCA GCTGGAAACA
GACCTCGACG GCATTTATCG CCAGTTCTTT GAAAAAGGGC GCTCCATCGT CCTCGCTTTC
CCGGATAACA ACGAAAAAGC GGTCAGTGGC GCACACCAGA AACTGTGCCC TACCTGCCTG
AAACTGAACC GACAGTCCAG CGTCCAGTGT GGACATTGTG GTCATACAGA GCTGTTGCAG
GTACTGATCC CGGATATGCT CAAAGAGCGT AAGGACGAGC TGGAGTTTGC TAATGAATGC
CCGTACTGCA ACAGCAAACA GGGGATTTCG ATTTTGGGGT CACGGGCTGC CAGTCTGTCG
GCGGTGATGA TTCACCAGCT TTATGGCAGC CAGTTCAACG AACATAAAAA GCTGATTACG
TTTTCTGACT CGGTACAAGA CGCCGCGCAT CGTGCCAGCT TTTTTACTGC CCGAACCTGG
CCGCTGATGA TTCGTGGGCA AATCGCCAGT GTTCTTGGCG AAAAAGAGAC ATTACCGCTG
GATGCGTTCG CGGCGCGTGT TTGCCAACAA ACGCGTGAAC GTTCACCGGA CGATGCTCAT
TTTGCAGCGA ACTTCATCGC ACCAAATATG CAGTGGCTGA ATGATTATCA GACGCTGAAA
AATGAAGGCA AACTGGCGGA GAACTCCGAT CTGCCGGAGC TGGTTTCCCT GCGCCTCGAC
TGGGAGGTGT ACAGCGAATT TACCCTGCGC GCGCGTATCG GACGTACGCT GGAAGCCACC
GGTTATGCCG TTGCCGGAGT GGATAAAGAA CGCTTTAATC CGGCAATTAC CGCCCTGCAT
CAACAGCTTT GTGAAGAGCT GGGTGATGAG ATGTCCGGTG TGAGCGTCGA GCAGGTCGCG
CACCTGGCGC TGGGGGTTAT TTGGTATCAA CGCCAGGCCG GGGCCGTTAT GCATCCGGCG
TTCGAAAGTT ATCGCCGTGA TGGCACGACC TTTATGATGA CGCAAAAAGA GCGTACCTCG
CGCTATATGC CTTCTATCGG TCCGAAAACG CGTAAACCGG CTTATGCGTC GTTTGAAAAA
ATTAATGGTT TCCATCGCCT GATTGGCGCG AAGTCTAACC CCAGTTGGTA TCAGCATTGG
ATCAATCGCA CGCTGAGTAA CGGCAATAAT CTGTTTATCA GTAGCGTTGC GGAAACGGTG
TTACGACGCC TGTTTACGGC GTTGAAAATA GCCGGAGTAG TAAAAGATTT TGACACCAAA
GGGCGTGAAG CCTGGGGACT GGTGCCTTCG GCGCTGGTGG TGAGCCGTGA CGTCGTTCAG
CTTAATTGCT CATGTTGCCG TGAGGTTGTC CGGGCTCCGG CCGATCAAGG CTGGCAGTGG
CGTAATGCGC CTTGTCTCTC TTTACGTTGT GAAGGTCGTT ACCAGGAAGT CGACAATACG
GCGACCTGGC GTTGGGAGAA CATGGACATC GCGCGCGTGC AGGGCGCAGA ACACACGGGG
CTGCTTAGCC GTGAAGATCG CGAAGCCACC GAAAAATCGT TCTACCGCGG CAACCAACCG
TGGAATATCA ACCTGTTGTC GGCAACACCG ACGCTGGAGA TGGGTATCGA CGTTGGGGAT
CTTTCCACCG TTTTACTCTG TTCTGTCCCA CCTGCTCAGG CCAACTACTT GCAGCGTATT
GGTCGCGCCG GTCGTAAAGA TGGTAACGCG TTAAACATTA CCGTGGCAGA AGGGAACCCG
CACGATCAGT TTTTCTTTGA AGAACCACTG GAGATGATGC AGGGCCAGGT GCAGGCTCCT
GGCGTCTTCC TCAATGCAAC GGCTATTCTC GAACGCCAGC TGGCAGCTTT TTGTATGGAT
AACTGGGTGA AAACCGGTGT ACCAGAATCC GCTATCTGTA AAAACGTCAA ACAGATGCTG
GATGAGCTGG AGTTCGGGCG TAAATCGGGT TTTCCGTATA ACTTACTGAG ATATATCGAA
CAGCATCATG CGGAGATTGC TGCACAATTT ACGGCGATCT TCCCCGATCT TGCCGCAGAA
ACTCGCCAAC AGTTGTTGTC TTATCTTCAG GGTGCGCCTG GACAGCGTTC GCTGGTGCAG
CGTATCGAAG AAGCGTTAAA ACTGCTGGTG GAAGATCGCA AATCTCTGCG TTCACGCATC
GATAAACTCA AGCGCAGTAT CGATAAGCTG GAGAACGCGC CGCGCGATCA AAACTTTGAC
AGCGATATGC GCGAGTTAAC TTCAGAACGG CAGGCGCTGA TGGCGCTGGT AAATCAAATC
AACAATAAGC AGACGCTGAA TTTCCTCACG GATGAAGGTC TGCTGCCTAA CTACGCCTTC
CCGGAAGCCG GTATTACGTT ACGTTCTGTG CTCTGGCGGC GTAAAGAAGG CGGGGAAGCG
CGTGAATATC AAAACACCAC TTTCGAATAT GAACGCCCGG CATCAACGGC GCTGGCTGAG
CTGGCTCCGC TGAATAATTT CTATGCCGGT GGGCATAAAG TTGAAATTGA GCAGATAGAC
CTGAAGGTCT CTGAGCCGGA GAACTGGCGT ATCTGTAGCC ACTGTAACTA CAGCGAAAAT
ATCGACCAGA CGGGCGACCA GCATAAATAT TGCCCGAAAT GTGGCACACC GGGGTGGGCC
GACGCCGGAC AAAAAACCAC GCTGCTGAAA CTTCGCCAGG TGTATGCCCG CGCCAGCGCA
CGTGATAGCC AGATCAGCGA CGAGAGCGAC AGCCGTGAAC CTGCTTTCTT CCAGCGTCAG
CTATTGGTTA GTTTCGAAAA AGAAGATGTA TCGGCGGCAT ACGCGATTGA GGAAGGCGAA
GTTCCGTTTG GTTTTGAATT TTTAAGCAAA GTCACCCTGC GGGATATCAA CTTCGGCAAA
ATGGCGGATG ATGCCAATGA GTTGATGATT GCCGGAGAAG CGAAGAAGCG AACCGGGTTT
AAAGTTTGCC TCGGGTGCGG CATGGTGCAG CGTCCTCGCG ATCATGAACC ACGTCATGAT
TTGAGCTGCA AATATCGCAC GGAACCCGAA AAGGCGAAGT TCGAAGATTA TCTCTATCTC
TATCGCCAGC TGGAGTCAGA AGCGTTGCGT ATTCTGCTCC CGGTAAGCAG TTACAGTAAT
GACCGTGTCG TGGAGGCTTC TCTTGGGGCG GCGATCCAGC TAGGTCTTAA ACATTACTTC
AAGGGGAATG TCGATCACCT GAAAGGCGTT GTGTACCGCG AGCCGGAAAA TGAAGGCGAA
TCCTGGCGGC AGTATCTGGT GATTTACGAT ACCGTCCCGG GGGGAACTGG TTCTCTTAAA
GAGCTGATGC GCACTCCCGA CAATTTGCTG AAATTACTTG AACTGGCCTA TCAGGCGATA
GTGGAATGCA GTTGCAACCA TGATACGCAT AAAGATGGTT GTTATCGTTG CGTTTACGCT
TACCGTGACC GTGGGCGCAT GAAGTATGTC TCCCGCGATC AGGCGCGTCT CTTGCTGGCG
AAAATTTTGC AGGCAAGAGA TTCGATACGG GTAATTGATT CCATCAAAAA CATTTCCCTC
GAAGCCATGA TGGGCAGTGA GCTGGAAAAA CGGTTTATTA GCTGCCTGCA AGAAAATAAA
AACCTGATTG TCAGTCGCAG TTACGCGCAT CAGGGCGCTG GGTGGATTAT TAACACCCGC
AGCGAACCGA TGATGAGCTG GCATCTTAAA GCTCAGGTGG ATTTAGGCGC TAAAGAGGCG
GTGGGGATCC CTTGTCGCCC GGATTACGTG CTATATCCGC TTATGCAGTC TGATGCCATT
AAACCGGTAG CTATTTTCCT TGATGGCTTT GCGTTTCACA AAAATAGCGT CGCAGAGGAT
GTGCAAAAAC GCCAGGCGAT TCGGGATAGC GATAATTTCT GGGTGTGGAC AGTCACGTGG
GCCGATCTCA AAGAGCCTGG GCTTAAACAT GTTCAGGATG TCCTGGGGCT TGGGCATAAC
CCGGATATGA AACAGCCTAA GTTTTATAAC CTGTTTCACG ATACCAACTT TGCGGCCCTT
GAAGCGTCGT TCCGGGAACG CAACAGTTTT GCACTGCTGC TGGATTATCT CGCCGATCCG
GGAGGAAGAA CGCAGTTATG GCAGAAAATG GCTGCTGCAC ATGCCTGGGT GTGGTTGGAT
GTGAAGAAGT CACAGGACGC GGGAACGAAA CAAAAGTATG CCTATGAAAT GCAGGAAAAC
GCGCCAGCCT GGCGGCTAGC AGAGCTTTTG CCAGACGAAC CGTTTGTCTT TGGTGGTTTA
CTCGATAGCT GTAACTCATC GCAGCAATTT ATTGAGCTGG CTTCGGTGTT GCCACAACAA
GCCATTAAAC CGACGACCAG TGTCGCACAA ATGCGCAGCT GGCTGCGTTT GCATATCTGT
TTTGACGATC GCTATACGCA GGATGACGGT TATGAAGCGG GACTCAATGG CTTCTGGCGA
CTGGTAAACC TGTTACAGTT CCTGCCGGAT ATGACCTTTA CCAGCCGTAA AGCCGTGCAT
TTACCGCAGG AAAGCGTTGA CGTTAAAGTT ACGGCAACGC CAGAGGCAGT ACCAGAGACT
GATGAAAGTT GGGCTGAGAT TATTGAGTTT GGCTTATTAA GCGCTGAAGA GATCGCGTTG
CTTCAGTCTC ATTCTCTCTC TGCGCCGACT CTCGGCTACG AATTGCAAAA TGATGAAGGT
GAAATTATTG CGGAAGCCGA TCTCGCCTGG CCATCACAAA AATGGGCATT GATTATTGAT
AATCAAGAAT TTATTCCATT ATTCACAACC AGGGGTTGGC ACGTTGCATT CGGGCCAATT
GACGAAAATA CATTGCAACA TCTGTCCGGA GGTGACAAAT GA
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| Protein sequence | MLPSVVSRQV ADSVAAFLRA AFPLNSPLFN GENNDNVSML EQFLAQPETL LKGPYLSAQL
PFRKSDLPLN FFPNLTLPFP PHAHQARAFQ RLGSDAPQPT LVATGTGSGK TECFMFPLLN
HCAGASQAGV KAIIIYPMNA LATDQASRFA KTIASDPQLH GKVTVGLFVG DSEIEPSKKM
SAEKVITCKH TLRESPPDIL LTNYKMLDYL LMRPGDQPLW RYNQPGSLRY LVVDELHTFD
GAQGSDLACL VRRLKHHIGV DNQRFACVGT SATVGDELGQ LLDYAKTIFD QPFTDDAVIR
EDRYTAAEYL QDYAIAYSQY PGPEVASALD PQSYATPVAY LNGQIPLWFP DSDLQLPDDL
ESDDGREKRI ALGSLLRRHS VMHVLLHDLQ GGILSERECL ENLQVMLAES ADHARRVLQS
ILALIAQARL EVPETEHDRQ KRLQAKKVRP VLPFVQLRSQ LWLREMRRLV ASVAKTPRLV
FADDVAVEDR EHYLPVIHCR DCHATGWASL RHGQSVQLET DLDGIYRQFF EKGRSIVLAF
PDNNEKAVSG AHQKLCPTCL KLNRQSSVQC GHCGHTELLQ VLIPDMLKER KDELEFANEC
PYCNSKQGIS ILGSRAASLS AVMIHQLYGS QFNEHKKLIT FSDSVQDAAH RASFFTARTW
PLMIRGQIAS VLGEKETLPL DAFAARVCQQ TRERSPDDAH FAANFIAPNM QWLNDYQTLK
NEGKLAENSD LPELVSLRLD WEVYSEFTLR ARIGRTLEAT GYAVAGVDKE RFNPAITALH
QQLCEELGDE MSGVSVEQVA HLALGVIWYQ RQAGAVMHPA FESYRRDGTT FMMTQKERTS
RYMPSIGPKT RKPAYASFEK INGFHRLIGA KSNPSWYQHW INRTLSNGNN LFISSVAETV
LRRLFTALKI AGVVKDFDTK GREAWGLVPS ALVVSRDVVQ LNCSCCREVV RAPADQGWQW
RNAPCLSLRC EGRYQEVDNT ATWRWENMDI ARVQGAEHTG LLSREDREAT EKSFYRGNQP
WNINLLSATP TLEMGIDVGD LSTVLLCSVP PAQANYLQRI GRAGRKDGNA LNITVAEGNP
HDQFFFEEPL EMMQGQVQAP GVFLNATAIL ERQLAAFCMD NWVKTGVPES AICKNVKQML
DELEFGRKSG FPYNLLRYIE QHHAEIAAQF TAIFPDLAAE TRQQLLSYLQ GAPGQRSLVQ
RIEEALKLLV EDRKSLRSRI DKLKRSIDKL ENAPRDQNFD SDMRELTSER QALMALVNQI
NNKQTLNFLT DEGLLPNYAF PEAGITLRSV LWRRKEGGEA REYQNTTFEY ERPASTALAE
LAPLNNFYAG GHKVEIEQID LKVSEPENWR ICSHCNYSEN IDQTGDQHKY CPKCGTPGWA
DAGQKTTLLK LRQVYARASA RDSQISDESD SREPAFFQRQ LLVSFEKEDV SAAYAIEEGE
VPFGFEFLSK VTLRDINFGK MADDANELMI AGEAKKRTGF KVCLGCGMVQ RPRDHEPRHD
LSCKYRTEPE KAKFEDYLYL YRQLESEALR ILLPVSSYSN DRVVEASLGA AIQLGLKHYF
KGNVDHLKGV VYREPENEGE SWRQYLVIYD TVPGGTGSLK ELMRTPDNLL KLLELAYQAI
VECSCNHDTH KDGCYRCVYA YRDRGRMKYV SRDQARLLLA KILQARDSIR VIDSIKNISL
EAMMGSELEK RFISCLQENK NLIVSRSYAH QGAGWIINTR SEPMMSWHLK AQVDLGAKEA
VGIPCRPDYV LYPLMQSDAI KPVAIFLDGF AFHKNSVAED VQKRQAIRDS DNFWVWTVTW
ADLKEPGLKH VQDVLGLGHN PDMKQPKFYN LFHDTNFAAL EASFRERNSF ALLLDYLADP
GGRTQLWQKM AAAHAWVWLD VKKSQDAGTK QKYAYEMQEN APAWRLAELL PDEPFVFGGL
LDSCNSSQQF IELASVLPQQ AIKPTTSVAQ MRSWLRLHIC FDDRYTQDDG YEAGLNGFWR
LVNLLQFLPD MTFTSRKAVH LPQESVDVKV TATPEAVPET DESWAEIIEF GLLSAEEIAL
LQSHSLSAPT LGYELQNDEG EIIAEADLAW PSQKWALIID NQEFIPLFTT RGWHVAFGPI
DENTLQHLSG GDK
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