Gene EcSMS35_4737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4737 
Symbol 
ID6143414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4834680 
End bp4835903 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content37% 
IMG OID641619552 
Producthypothetical protein 
Protein accessionYP_001746660 
Protein GI170682446 
COG category[S] Function unknown 
COG ID[COG4269] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.243262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.802179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT TAATTCAGGG AATTTTTATG GCTCAAGTTA TTAATGATAT GGATGTTCCG 
TCCCATTCGT TTGTTTTTCA TGGTACAGGT GAGAGATATT TTCTTATTTG TGTGGTGAAT
GTGTTGTTAA CGATTATAAC GCTAGGTATC TATTTACCAT GGGCATTAAT GAAATGTAAG
CGTTATCTCT ATGCTAATAT GGAAGTTAAC GGACAACGAT TTTCTTATGG GATTACCGGT
GGGAATGTTT TTGTTAGTTG TCTTGTTTTT GTTTTTTTCT ATTTCGCAAT CTTAATGACA
GTGTCAGCAG ATATGCCGCT TATTGGCTGT GTTTTGACTT TGTCACTGTT GGTTTTGCTT
ATATTTATGG CAGCAAAAGG ACTGCGTTAT CAGGCCTTGA TGACCAGTCT CAACGGCGTA
AGATTTAGTT TTAATTGCTC TATGAAAGGG TTCTGGTGGG TGACCTTTTT CTTGCCGATT
TTAATGGCCC TTGGGATGGG GACTGTTTTC TTTATCTCGA CAAAGATGCT ACATGCCAAT
AGTTCAAGTA GCGTTATTAT ATCTGTGGTT CTGATGACAA TAGTTGGTAT TGTTTCCATT
GGTATTTTTA ATGGCACTTT ATATAGTCTG GTAATGAGTT TTCTCTGGAG TAATACCAGT
TTCGGTATAC ACCGTTTCAA GGTGAAATTA GATACTACAT ATTGTATAAA ATATGCCATT
CTCGCATTTT TAGCTTTATT ACCTTTTCTC GCTGTTGCTG GTTATATTAT CTTCGATCAA
ATATTAAATG AGTATGATAG TTCTGGGTAT GCAAATGATA ATATTGAGAA TTTACAGCAA
TTTATGGAAA TGCAACGTAA AATGATAATC GCGCAGTTAA TCTATTATTT TGGGATTGCT
GTTAGCACCA GTTATTTAAC GGTGTCGTTG CGAAATCATT TTATGAGCAA CCTGTCACTG
AATGATGGGC GTATTCGTTT TCGCTCAACT TTAACGTACC ACGGTATGCT TTATCGCATG
TGTGCGTTGG TGGTGATATC CGGGATTACG GGTGGTCTGG CTTACCCACT GCTGAAAATA
TGGATGATTG ACTGGCAGGC AAAAAATACG TATTTGCTGG GCGATTTGGA TGACCTTCCT
TTAATCAATA AAGAAGAACA ACCAGATAAA GGCTTCTTAG CCAGTATTTC ACGGGGAGTT
ATGCCTTCTT TACCATTTCT GTAA
 
Protein sequence
MDFLIQGIFM AQVINDMDVP SHSFVFHGTG ERYFLICVVN VLLTIITLGI YLPWALMKCK 
RYLYANMEVN GQRFSYGITG GNVFVSCLVF VFFYFAILMT VSADMPLIGC VLTLSLLVLL
IFMAAKGLRY QALMTSLNGV RFSFNCSMKG FWWVTFFLPI LMALGMGTVF FISTKMLHAN
SSSSVIISVV LMTIVGIVSI GIFNGTLYSL VMSFLWSNTS FGIHRFKVKL DTTYCIKYAI
LAFLALLPFL AVAGYIIFDQ ILNEYDSSGY ANDNIENLQQ FMEMQRKMII AQLIYYFGIA
VSTSYLTVSL RNHFMSNLSL NDGRIRFRST LTYHGMLYRM CALVVISGIT GGLAYPLLKI
WMIDWQAKNT YLLGDLDDLP LINKEEQPDK GFLASISRGV MPSLPFL