| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4696 |
|---|
| Symbol | |
|---|
| ID | 6147406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4794578 |
|---|
| End bp | 4795921 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641619512 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_001746620 |
|---|
| Protein GI | 170679891 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACA GTATTTTAGT CATACTCTGT TTGATCGCTG TAAGTGCGTT CTTCTCGATG
TCCGAGATCT CGCTTGCCGC CTCACGCAAA ATCAAACTTA AACTGCTGGC TGATGAAGGC
AATATAAATG CCCAACGCGT TCTGAATATG CAGGAAAATC CCGGCATGTT CTTTACCGTG
GTCCAAATCG GTCTGAACGC AGTGGCGATT CTCGGCGGTA TCGTCGGTGA TGCGGCATTT
TCTCCAGCTT TTCACAGCCT GTTCTCCCGC TATATGTCGG CAGAACTCTC TGAGCAACTG
AGCTTTATTC TCTCTTTCTC GTTAGTGACT GGCATGTTTA TCCTGTTTGC GGATTTAACC
CCGAAACGCA TCGGTATGAT TGCGCCAGAA GCTGTGGCTT TGCGTATCAT CAACCCGATG
CGCTTCTGCC TGTACGTTTG CACCCCGCTG GTGTGGTTCT TCAACGGACT GGCGAACATA
ATCTTCCGTA TTTTCAAACT GCCAATGGTA CGTAAAGATG ACATCACTTC TGATGACATC
TACGCGGTAG TGGAAGCCGG TGCGCTGGCA GGCGTGTTAC GTAAACAGGA ACACGAGCTG
ATTGAAAACG TCTTTGAGCT GGAATCCCGT ACCGTTCCGT CTTCAATGAC ACCGCGTGAA
AACGTGATTT GGTTTGATCT CCACGAAGAT GAGCAAAGTC TGAAGAATAA GGTGGCGGAA
CATCCGCACT CTAAGTTTCT CGTCTGTAAT GAAGATATTG ACCACATCAT CGGATATGTC
GATTCTAAAG ACCTGCTGAA CCGCGTGCTG GCTAACCAAA GCCTGGCACT GAACAGCGGC
GTACAAATTC GCAACACGCT GATTGTGCCG GATACGTTAA CCCTTTCAGA AGCGTTGGAA
AGTTTTAAAA CCGCAGGTGA AGACTTCGCG GTGATCATGA ACGAGTACGC GCTGGTAGTG
GGGATCATCA CCCTCAACGA CGTGATGACC ACGCTGATGG GCGATCTGGT CGGTCAGGGG
CTGGAAGAGC AGATTGTCGC CCGTGATGAG AACTCATGGC TGATTGACGG CGGCACCCCG
ATTGACGACG TCATGCGCGT GCTGGATATT GACGAGTTCC CGCAGTCGGG CAACTACGAA
ACCATCGGCG GCTTTATGAT GTTTATGCTG CGTAAGATCC CGAAACGCAC CGATTCGGTG
AAATTCGCCG GCTACAAATT TGAAGTGGTG GATATCGATA ACTACCGTAT CGACCAACTG
CTGGTGACCC GGATCGACAG CAAGGCCACC GCCCTTTCGC CAAAACTGCC TGACGCTAAA
GATAAAGAAG AAAGCGTCGC GTAA
|
|---|
| Protein sequence | MLNSILVILC LIAVSAFFSM SEISLAASRK IKLKLLADEG NINAQRVLNM QENPGMFFTV
VQIGLNAVAI LGGIVGDAAF SPAFHSLFSR YMSAELSEQL SFILSFSLVT GMFILFADLT
PKRIGMIAPE AVALRIINPM RFCLYVCTPL VWFFNGLANI IFRIFKLPMV RKDDITSDDI
YAVVEAGALA GVLRKQEHEL IENVFELESR TVPSSMTPRE NVIWFDLHED EQSLKNKVAE
HPHSKFLVCN EDIDHIIGYV DSKDLLNRVL ANQSLALNSG VQIRNTLIVP DTLTLSEALE
SFKTAGEDFA VIMNEYALVV GIITLNDVMT TLMGDLVGQG LEEQIVARDE NSWLIDGGTP
IDDVMRVLDI DEFPQSGNYE TIGGFMMFML RKIPKRTDSV KFAGYKFEVV DIDNYRIDQL
LVTRIDSKAT ALSPKLPDAK DKEESVA
|
|---|
| |